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动手实践医疗信息学计划核心数据集 - 从转换 MIMIC-IV 中获得的经验教训。

Hands on the Medical Informatics Initiative Core Data Set - Lessons Learned from Converting the MIMIC-IV.

机构信息

IT Center for Clinical Research (ITCR-L), University of Lübeck, Lübeck, Germany.

Institute of Medical Informatics, University of Lübeck, Lübeck, Germany.

出版信息

Stud Health Technol Inform. 2021 Sep 21;283:119-126. doi: 10.3233/SHTI210549.

Abstract

With the steady increase in the connectivity of the healthcare system, new requirements and challenges are emerging. In addition to the seamless exchange of data between service providers on a national level, the local legacy data must also meet the new requirements. For this purpose, the applications used must be tested securely and sufficiently. However, the availability of suitable and realistic test data is not always given. Therefore, this study deals with the creation of test data based on real electronic health record data provided by the Medical Information Mart for Intensive Care (MIMIC-IV) database. In addition to converting the data to the current FHIR R4, conversion to the core data sets of the German Medical Informatics Initiative was also presented and made available. The test data was generated to simulate a legacy data transfer. Moreover, four different FHIR servers were tested for performance. This study is the first step toward comparable test scenarios around shared datasets and promotes comparability among providers on a national level.

摘要

随着医疗系统的连接性稳步增长,新的需求和挑战也在不断涌现。除了在国家层面上实现服务提供商之间的数据无缝交换外,本地遗留数据也必须满足新的要求。为此,必须对所使用的应用程序进行安全且充分的测试。然而,并非总是能够获得合适和现实的测试数据。因此,本研究基于由医疗信息集市重症监护(MIMIC-IV)数据库提供的真实电子健康记录数据来创建测试数据。除了将数据转换为当前的 FHIR R4 之外,还提出并提供了向德国医疗信息学倡议核心数据集的转换。生成测试数据是为了模拟遗留数据传输。此外,还对四个不同的 FHIR 服务器进行了性能测试。本研究是围绕共享数据集进行可比测试场景的第一步,并促进了国家层面上提供者之间的可比性。

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