The Swire Institute of Marine Science and Division for Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, Hong Kong S.A.R., People's Republic of China.
Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9700 CC, Groningen, The Netherlands.
BMC Ecol Evol. 2021 Sep 23;21(1):180. doi: 10.1186/s12862-021-01914-6.
Mangroves are tropical and subtropical intertidal forests colonising sheltered coasts across the world. They host a unique faunal community, dominated by brachyuran crabs and gastropods. These invertebrates strongly contribute to the functionality of the entire forest. The reliable assessment of mangrove faunal diversity is, thus, a crucial step for efficient management and conservation plans, but it is hindered by difficulties in species identification. Here we provide a verified DNA barcode library for brachyuran crabs and gastropods inhabiting the mangroves of the Greater Bay Area, Southern China. In particular, we collected and morphologically identified 1100 specimens of mangrove associated brachyuran crabs and gastropods. The partial sequences of the mtDNA cytochrome oxidase subunit I gene were obtained from 275 specimens. Barcode sequences were then used to delineate Molecular Operational Taxonomic Units (MOTUs), employing three different delimitation methods: the automatic barcode gap discovery (ABGD) method, the general mixed Yule coalescent (GMYC) model and a Bayesian implementation of the Poisson tree processes (bPTP) model.
By integrating DNA barcodes with morphology, we identified 44 gastropod species and 58 brachyuran species associated with Hong Kong mangroves, with five and seven new records, for gastropods and crabs, respectively, for the Greater Bay Area. The delineation of MOTUs based on barcode sequences revealed a strong congruence between morphological and molecular identification for both taxa, showing the high reliability of the barcode library.
This study provides the first reference barcode library for mangrove-associated macrobenthic fauna in the Greater Bay Area and represents a reliable tool to management and conservation plans. Our molecular analyses resolved long lasting taxonomic misidentifications and inconsistencies and updated the knowledge on the geographical distribution of Asian mangrove associated fauna, ultimately highlighting a level of biodiversity higher than previously thought for Southern China.
红树林是热带和亚热带潮间带森林,分布于世界各地的避风海岸。它们拥有独特的动物群落,主要由短尾亚目蟹和腹足纲动物组成。这些无脊椎动物对整个森林的功能有重要贡献。因此,可靠地评估红树林动物多样性是制定有效管理和保护计划的关键步骤,但物种鉴定困难阻碍了这一进程。本研究提供了中国南方粤港澳大湾区红树林中短尾亚目蟹和腹足纲动物的经验证 DNA 条形码文库。特别是,我们收集并通过形态学鉴定了 1100 个红树林相关短尾亚目蟹和腹足纲动物标本。从 275 个标本中获得了 mtDNA 细胞色素氧化酶亚基 I 基因的部分序列。然后使用三种不同的划分方法(自动条形码间隙发现(ABGD)方法、广义混合 Yule 合并(GMYC)模型和泊松树过程(bPTP)模型的贝叶斯实现),基于条形码序列来划分分子操作分类单元(MOTUs)。
通过将 DNA 条形码与形态学相结合,我们确定了 44 种腹足纲动物和 58 种与香港红树林相关的短尾亚目动物,其中腹足纲和短尾亚目分别有 5 种和 7 种新记录,是粤港澳大湾区的新记录。基于条形码序列划分的 MOTUs 在两种分类群中均显示出形态学和分子鉴定之间的强一致性,表明条形码文库具有很高的可靠性。
本研究提供了粤港澳大湾区红树林相关大型底栖动物的首个参考条形码文库,是管理和保护计划的可靠工具。我们的分子分析解决了长期存在的分类学错误识别和不一致问题,并更新了亚洲红树林相关动物地理分布的知识,最终突出了中国南方比以前认为的更高的生物多样性水平。