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通过基于结构的虚拟筛选发现噻唑烷-4-酮类似物作为选择性 GSK-3β抑制剂。

Discovery of thiazolidin-4-one analogue as selective GSK-3β inhibitor through structure based virtual screening.

机构信息

Department of Pharmacy, Central University of Rajasthan, Bandarsindari, Ajmer, Rajasthan 305817, India.

Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, ul. Pasteura 1, 02-093 Warsaw, Poland.

出版信息

Bioorg Med Chem Lett. 2021 Nov 15;52:128375. doi: 10.1016/j.bmcl.2021.128375. Epub 2021 Sep 21.

Abstract

GSK-3β directly phosphorylate tubulin binding site of tau protein, indicating its importance in tau aggregation and, therefore, in Alzheimer's disease pathology. New GSK-3β inhibitors were identified using a structure-based screening, ADMET analysis. These studies revealed that ZINC09036109, ZINC72371723, ZINC72371725, and ZINC01373165 approached optimal ADMET properties along with good MM-GBSA dG binding. Protein kinase assays of these compounds against eight disease-relevant kinases were performed. During disease-relevant kinase profiling, ZINC09036109 ((E)-2-((3,4-dimethylphenyl)imino)-5-(3-methoxy-4-(naphthalen-2-ylmethoxy)benzyl)thiazolidin-4-one) emerged as a selective GSK-3β inhibitor with more than 10-fold selectivity over other disease-relevant kinases. Molecular dynamics study of ZINC09036109 molecule revealed interactions with Ile62, Phe67, Val135, Leu188, Asp200 amino acid residues of the binding site of GSK-3β, which were highly comparable to the co-crystallized molecule and hence validating comparative better activity of this compound compared to overall screened molecules.

摘要

GSK-3β 可直接磷酸化 tau 蛋白的微管结合位点,表明其在 tau 聚集以及阿尔茨海默病病理中的重要性。通过基于结构的筛选和 ADMET 分析,发现了新的 GSK-3β 抑制剂。这些研究表明,ZINC09036109、ZINC72371723、ZINC72371725 和 ZINC01373165 具有最佳的 ADMET 特性和良好的 MM-GBSA dG 结合,接近理想状态。对这些化合物进行了针对八种疾病相关激酶的蛋白激酶测定。在疾病相关激酶分析过程中,ZINC09036109((E)-2-((3,4-二甲基苯基)亚氨基)-5-(3-甲氧基-4-(萘-2-基甲氧基)苄基)噻唑烷-4-酮)作为一种选择性 GSK-3β 抑制剂脱颖而出,对其他疾病相关激酶的选择性超过 10 倍。ZINC09036109 分子的分子动力学研究揭示了与 GSK-3β 结合位点的 Ile62、Phe67、Val135、Leu188 和 Asp200 氨基酸残基的相互作用,与共结晶分子高度相似,从而验证了与整体筛选分子相比,该化合物具有更好的活性。

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