Department of Molecular Genetics, University of Toronto, Toronto, Canada.
Division of Nephrology, University Health Network, Toronto, Canada.
BMC Nephrol. 2021 Sep 26;22(1):320. doi: 10.1186/s12882-021-02524-6.
Focal and segmental glomerulosclerosis (FSGS) is a histologic pattern of injury that characterizes a wide spectrum of diseases. Many genetic causes have been identified in FSGS but even in families with comprehensive testing, a significant proportion remain unexplained.
In a family with adult-onset autosomal dominant FSGS, linkage analysis was performed in 11 family members followed by whole exome sequencing (WES) in 3 affected relatives to identify candidate genes.
Pathogenic variants in known nephropathy genes were excluded. Subsequently, linkage analysis was performed and narrowed the disease gene(s) to within 3% of the genome. WES identified 5 heterozygous rare variants, which were sequenced in 11 relatives where DNA was available. Two of these variants, in LAMA2 and LOXL4, remained as candidates after segregation analysis and encode extracellular matrix proteins of the glomerulus. Renal biopsies showed classic segmental sclerosis/hyalinosis lesion on a background of mild mesangial hypercellularity. Examination of basement membranes with electron microscopy showed regions of dense mesangial matrix in one individual and wider glomerular basement membrane (GBM) thickness in two individuals compared to historic control averages.
Based on our findings, we postulate that the additive effect of digenic inheritance of heterozygous variants in LAMA2 and LOXL4 leads to adult-onset FSGS. Limitations to our study includes the absence of functional characterization to support pathogenicity. Alternatively, identification of additional FSGS cases with suspected deleterious variants in LAMA2 and LOXL4 will provide more evidence for disease causality. Thus, our report will be of benefit to the renal community as sequencing in renal disease becomes more widespread.
局灶节段性肾小球硬化症(FSGS)是一种损伤的组织学模式,其特征为广泛的疾病谱。FSGS 中有许多遗传原因已被确定,但即使在进行全面检测的家族中,仍有很大一部分原因仍未得到解释。
在一个具有成年发病常染色体显性遗传 FSGS 的家族中,对 11 名家族成员进行了连锁分析,随后对 3 名受累亲属进行了全外显子组测序(WES),以鉴定候选基因。
排除了已知肾病基因中的致病性变异。随后,进行了连锁分析,将疾病基因缩小到基因组的 3%以内。WES 鉴定出 5 个杂合的罕见变异,在有 DNA 的 11 名亲属中对这些变异进行了测序。在分离分析后,其中 2 个变异,即 LAMA2 和 LOXL4 中的变异,仍然是候选基因,它们编码肾小球的细胞外基质蛋白。肾脏活检显示,在轻度系膜细胞增生的背景上,出现典型的节段性硬化/玻璃样变病变。电子显微镜检查基底膜显示,在 1 名个体中存在密集的系膜基质区域,在 2 名个体中存在较宽的肾小球基底膜(GBM)厚度,与历史对照平均值相比。
根据我们的发现,我们推测 LAMA2 和 LOXL4 杂合变异的双基因遗传的累加效应导致成年发病 FSGS。我们研究的局限性包括缺乏支持致病性的功能特征。或者,在疑似具有 LAMA2 和 LOXL4 有害变异的 FSGS 病例中发现更多病例,将为疾病因果关系提供更多证据。因此,随着肾脏疾病测序的广泛开展,我们的报告将对肾脏社区有益。