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迈向对玻尔互补性的更全面理解:来自离子通道建模的见解

Toward a More General Understanding of Bohr's Complementarity: Insights from Modeling of Ion Channels.

作者信息

Kesić Srdjan

机构信息

Department of Neurophysiology, Institute for Biological Research "Siniša Stanković"-National Institute of the Republic of Serbia, University of Belgrade, Despot Stefan Blvd., 142, 11060, Belgrade, Serbia.

出版信息

Acta Biotheor. 2021 Dec;69(4):723-744. doi: 10.1007/s10441-021-09424-0. Epub 2021 Sep 28.

DOI:10.1007/s10441-021-09424-0
PMID:34585309
Abstract

Some contemporary theorists such as Mazzocchi, Theise and Kafatos are convinced that the reformed complementarity may redefine how we might exploit the complexity theory in 21st-century life sciences research. However, the motives behind the profound re-invention of "biological complementarity" need to be substantiated with concrete shreds of evidence about this principle's applicability in real-life science experimentation, which we found missing in the literature. This paper discusses such pieces of evidence by confronting Bohr's complementarity and ion channel modeling practice. We examine whether and to what extent this principle might assist in developing ion channel models incorporating both deterministic and stochastic solutions. According to the "mutual exclusiveness of experimental setups" version of Bohr's complementarity, this principle is needed when two mutually exclusive perspectives or approaches are right, necessary in a particular context, and are not contradictory as they arise in mutually exclusive conditions (mutually exclusive experimental or modeling setups). A detailed examination of the modeling practice reveals that both solutions are often used simultaneously in a single ion channel model, suggesting that the opposite conceptual frameworks can coexist in the same modeling setup. We concluded that Bohr's complementarity might find applications in these complex modeling setups but only through its realistic phenomenological interpretation that allows applying different modes of description regardless of the nature of the underlying ion channel opening process. Also, we propose the combined use of complementarity and Complex thinking in building the multifaceted ion channel models. Overall, this paper's results support the efforts to establish a more general form of complementarity to meet today's complexity theory-inspired life sciences modeling demands.

摘要

一些当代理论家,如马佐基、泰斯和卡法托斯,坚信经过改进的互补性可能会重新定义我们在21世纪生命科学研究中利用复杂性理论的方式。然而,“生物互补性”进行深度重塑背后的动机,需要用关于这一原理在现实科学实验中适用性的确凿证据来证实,而我们在文献中并未找到此类证据。本文通过对比玻尔的互补性和离子通道建模实践来探讨这些证据。我们研究这一原理是否以及在何种程度上有助于开发同时包含确定性和随机解的离子通道模型。根据玻尔互补性中“实验设置的相互排斥性”这一版本,当两种相互排斥的观点或方法都是正确的、在特定背景下是必要的,并且在相互排斥的条件下(相互排斥的实验或建模设置)出现时并不矛盾时,就需要这一原理。对建模实践的详细考察表明,在单个离子通道模型中,这两种解常常同时被使用,这表明相反的概念框架可以在同一建模设置中共存。我们得出结论,玻尔的互补性可能会在这些复杂的建模设置中得到应用,但前提是要通过其现实的现象学解释,这种解释允许应用不同的描述模式,而不论潜在的离子通道开放过程的性质如何。此外,我们建议在构建多方面的离子通道模型时结合使用互补性和复杂性思维。总体而言,本文的结果支持为满足当今受复杂性理论启发的生命科学建模需求而建立更一般形式的互补性所做的努力。

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