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对来自野外且无系统共生证据的蜘蛛肠道细菌群落的见解。

Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis.

作者信息

Tyagi Kaomud, Tyagi Inderjeet, Kumar Vikas

机构信息

Centre for DNA Taxonomy, Molecular Systematics Division, Zoological Survey of India, Kolkata 700053, India.

出版信息

Saudi J Biol Sci. 2021 Oct;28(10):5913-5924. doi: 10.1016/j.sjbs.2021.06.059. Epub 2021 Jun 24.

Abstract

In the present study, an effort has been made to elucidate the gut bacterial diversity of twelve species of the family Araneidae under three subfamilies collected from 5 states of India along with their predicted metabolic role in functional metabolism. Further, we also compared the host species phylogeny based on partial cytochrome c oxidase subunit I (COI) sequences with the gut bacteria composition dendrogram to decipher the phylosymbiotic relationships. Analysis revealed the presence of 22 bacterial phyla, 145 families, and 364 genera in the gut, with Proteobacteria, Firmicutes, Actinobacteria, and Deinococcus-Thermus as the highest abundant phyla. Moreover, phylum Bacteriodetes was dominated only in and Chlamydiae in . At the genus level, , , , , and were the most dominant genera. Furthermore, the genus was observed only in and endosymbiont only in . The differential abundance analysis (DeSeq2) revealed the 19 significant ASVs represented by the genera like , , , , , , , , , and . The inter- and intra-subfamilies comparison based on diversity indices (alpha and beta diversity) revealed that the subfamily Araneinae have high richness and diversity than Argiopinae and Gasteracanthinae. The phylosymbiotic analysis revealed that there is no congruence between the gut bacteria composition dendrogram with their host phylogeny.

摘要

在本研究中,我们努力阐明了从印度5个邦收集的3个亚科下12种园蛛科蜘蛛的肠道细菌多样性,以及它们在功能代谢中的预测代谢作用。此外,我们还基于细胞色素c氧化酶亚基I(COI)部分序列的宿主物种系统发育与肠道细菌组成树状图进行比较,以解读系统共生关系。分析显示,肠道中存在22个细菌门、145个科和364个属,其中变形菌门、厚壁菌门、放线菌门和嗜热栖热放线菌门是丰度最高的门。此外,拟杆菌门仅在[具体物种1]中占主导,衣原体门仅在[具体物种2]中占主导。在属水平上,[具体属1]、[具体属2]、[具体属3]、[具体属4]、[具体属5]和[具体属6]是最主要的属。此外,仅在[具体物种3]中观察到[具体属7],仅在[具体物种4]中观察到内共生菌[具体属8]。差异丰度分析(DeSeq2)显示,19个显著的ASV由[具体属9]、[具体属10]、[具体属11]、[具体属12]、[具体属13]、[具体属14]、[具体属15]、[具体属16]、[具体属17]和[具体属18]等属代表。基于多样性指数(α和β多样性)的亚科间和亚科内比较显示,园蛛亚科的丰富度和多样性高于金蛛亚科和棘腹蛛亚科。系统共生分析显示,肠道细菌组成树状图与其宿主系统发育之间没有一致性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/164b/8459122/20b44007c915/gr1.jpg

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