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用流式细胞术监测持留菌复苏。

Monitoring Persister Resuscitation with Flow Cytometry.

机构信息

Department of Chemical and Biomolecular Engineering, University of Houston, Houston, TX, USA.

出版信息

Methods Mol Biol. 2021;2357:209-222. doi: 10.1007/978-1-0716-1621-5_14.

DOI:10.1007/978-1-0716-1621-5_14
PMID:34590261
Abstract

Persister cells are defined as a small fraction of phenotypic variants in a cell population that are temporarily tolerant to bactericidal antibiotics. Persisters are not mutant cells; they generally survive lethal concentrations of antibiotics due to their transient nongrowing state. Persister cells have the ability to resuscitate after the end of antibiotic treatment. Despite significant advancements in the understanding of the molecular mechanisms underlying persister formation, we still have little information about their resuscitation mechanisms. In this chapter, we describe a method to detect and monitor persister resuscitation at the single-cell level using flow cytometry analysis. This method enables us to not only assess the resuscitation characteristics of persisters but also determine and quantify various subpopulations in antibiotic-treated cultures, including viable but nonculturable (VBNC) and dead cells.

摘要

持留细胞被定义为细胞群体中表型变异的一小部分,它们暂时耐受杀菌抗生素。持留细胞不是突变细胞;它们通常由于其短暂的非生长状态而在致死浓度的抗生素下存活。持留细胞在抗生素治疗结束后有能力复苏。尽管在理解持留形成的分子机制方面取得了重大进展,但我们对它们的复苏机制仍然知之甚少。在本章中,我们描述了一种使用流式细胞术分析在单细胞水平上检测和监测持留细胞复苏的方法。该方法不仅使我们能够评估持留细胞的复苏特征,还能够确定和量化抗生素处理培养物中的各种亚群,包括活但不可培养(VBNC)和死亡细胞。

相似文献

1
Monitoring Persister Resuscitation with Flow Cytometry.用流式细胞术监测持留菌复苏。
Methods Mol Biol. 2021;2357:209-222. doi: 10.1007/978-1-0716-1621-5_14.
2
Flow-cytometry analysis reveals persister resuscitation characteristics.流式细胞术分析揭示了持久复苏的特征。
BMC Microbiol. 2020 Jul 8;20(1):202. doi: 10.1186/s12866-020-01888-3.
3
Deletion Impairs Persister Cell Resuscitation in Escherichia coli.缺失会损害大肠杆菌中持久细胞的复苏。
mBio. 2022 Feb 22;13(1):e0218721. doi: 10.1128/mbio.02187-21. Epub 2022 Jan 18.
4
Persister Escherichia coli Cells Have a Lower Intracellular pH than Susceptible Cells but Maintain Their pH in Response to Antibiotic Treatment.持留型大肠杆菌细胞的细胞内pH值低于敏感型细胞,但在抗生素处理时能维持其pH值。
mBio. 2021 Aug 31;12(4):e0090921. doi: 10.1128/mBio.00909-21. Epub 2021 Jul 20.
5
Prophages and Growth Dynamics Confound Experimental Results with Antibiotic-Tolerant Persister Cells.噬菌体和生长动态使抗生素耐受持久细胞的实验结果复杂化。
mBio. 2017 Dec 12;8(6):e01964-17. doi: 10.1128/mBio.01964-17.
6
Viable but Nonculturable and Persister Cells Coexist Stochastically and Are Induced by Human Serum.活而不可培养细胞和持续存在细胞随机共存,并被人血清诱导。
Infect Immun. 2015 Nov;83(11):4194-203. doi: 10.1128/IAI.00404-15. Epub 2015 Aug 17.
7
Analyzing Persister Physiology with Fluorescence-Activated Cell Sorting.利用荧光激活细胞分选技术分析持留菌生理学特性。
Methods Mol Biol. 2016;1333:83-100. doi: 10.1007/978-1-4939-2854-5_8.
8
Resuscitation dynamics reveal persister partitioning after antibiotic treatment.复苏动力学揭示了抗生素治疗后的持久菌分隔。
Mol Syst Biol. 2023 Apr 12;19(4):e11320. doi: 10.15252/msb.202211320. Epub 2023 Mar 3.
9
Investigating the physiology of viable but non-culturable bacteria by microfluidics and time-lapse microscopy.通过微流控技术和延时显微镜技术研究活的但不可培养细菌的生理学。
BMC Biol. 2017 Dec 21;15(1):121. doi: 10.1186/s12915-017-0465-4.
10
Viable but non-culturable and persistence describe the same bacterial stress state.可培养但不可培养和持续存在描述了相同的细菌应激状态。
Environ Microbiol. 2018 Jun;20(6):2038-2048. doi: 10.1111/1462-2920.14075. Epub 2018 Apr 10.

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Proton Motive Force Inhibitors Are Detrimental to Methicillin-Resistant Staphylococcus aureus Strains.质子动力抑制剂对耐甲氧西林金黄色葡萄球菌菌株有害。
Microbiol Spectr. 2022 Aug 31;10(4):e0202422. doi: 10.1128/spectrum.02024-22. Epub 2022 Aug 9.
2
High-Throughput Screening of a Promoter Library Reveals New Persister Mechanisms in Escherichia Coli.高通量筛选启动子文库揭示大肠杆菌中新型持留菌形成机制。
Microbiol Spectr. 2022 Feb 23;10(1):e0225321. doi: 10.1128/spectrum.02253-21.

本文引用的文献

1
Flow-cytometry analysis reveals persister resuscitation characteristics.流式细胞术分析揭示了持久复苏的特征。
BMC Microbiol. 2020 Jul 8;20(1):202. doi: 10.1186/s12866-020-01888-3.
2
Identifying Metabolic Inhibitors to Reduce Bacterial Persistence.鉴定代谢抑制剂以降低细菌持久性
Front Microbiol. 2020 Mar 27;11:472. doi: 10.3389/fmicb.2020.00472. eCollection 2020.
3
Investigating the Effects of Osmolytes and Environmental pH on Bacterial Persisters.研究渗透剂和环境 pH 值对细菌持留菌的影响。
Antimicrob Agents Chemother. 2020 Apr 21;64(5). doi: 10.1128/AAC.02393-19.
4
Persister Cells Resuscitate Using Membrane Sensors that Activate Chemotaxis, Lower cAMP Levels, and Revive Ribosomes.持留菌细胞通过激活趋化作用、降低环磷酸腺苷(cAMP)水平并使核糖体复苏的膜传感器进行复苏。
iScience. 2020 Jan 24;23(1):100792. doi: 10.1016/j.isci.2019.100792. Epub 2019 Dec 21.
5
Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition).流式细胞术和细胞分选在免疫学研究中的应用指南(第二版)。
Eur J Immunol. 2019 Oct;49(10):1457-1973. doi: 10.1002/eji.201970107.
6
HokB Monomerization and Membrane Repolarization Control Persister Awakening.HokB 单体化和膜复极化控制持久休眠细胞苏醒。
Mol Cell. 2019 Sep 5;75(5):1031-1042.e4. doi: 10.1016/j.molcel.2019.06.015. Epub 2019 Jul 18.
7
Single-cell imaging and characterization of persister cells to ofloxacin in exponential cultures.单细胞成像和表型分析在指数生长期对氧氟沙星产生持续生长的细胞。
Sci Adv. 2019 Jun 19;5(6):eaav9462. doi: 10.1126/sciadv.aav9462. eCollection 2019 Jun.
8
Relationship between the Viable but Nonculturable State and Antibiotic Persister Cells.活而不灭状态与抗生素抗药细胞的关系。
J Bacteriol. 2018 Sep 24;200(20). doi: 10.1128/JB.00249-18. Print 2018 Oct 15.
9
Single cell observations show persister cells wake based on ribosome content.单细胞观察表明,根据核糖体含量,持久细胞会被唤醒。
Environ Microbiol. 2018 Jun;20(6):2085-2098. doi: 10.1111/1462-2920.14093. Epub 2018 Mar 26.
10
Formation, physiology, ecology, evolution and clinical importance of bacterial persisters.细菌持留菌的形成、生理、生态、进化和临床重要性。
FEMS Microbiol Rev. 2017 May 1;41(3):219-251. doi: 10.1093/femsre/fux001.