Department of Biology, Brandeis University, Waltham, Massachusetts 02453, United States.
Graduate Program in Chemistry, Brandeis University, Waltham Massachusetts 02453, United States.
ACS Infect Dis. 2021 Nov 12;7(11):3062-3076. doi: 10.1021/acsinfecdis.1c00342. Epub 2021 Sep 30.
Many bacterial pathogens, including , require inosine 5'-monophosphate dehydrogenase (IMPDH) for infection, making this enzyme a promising new target for antibiotics. Although potent selective inhibitors of bacterial IMPDHs have been reported, relatively few have displayed antibacterial activity. Here we use structure-informed design to obtain inhibitors of IMPDH (IMPDH) that have potent antibacterial activity (minimal inhibitory concentrations less than 2 μM) and low cytotoxicity in mammalian cells. The physicochemical properties of the most active compounds were within typical Lipinski/Veber space, suggesting that polarity is not a general requirement for achieving antibacterial activity. Five compounds failed to display activity in mouse models of septicemia and abscess infection. Inhibitor-resistant strains readily emerged . Resistance resulted from substitutions in the cofactor/inhibitor binding site of IMPDH, confirming on-target antibacterial activity. These mutations decreased the binding of all inhibitors tested, but also decreased catalytic activity. Nonetheless, the resistant strains had comparable virulence to wild-type bacteria. Surprisingly, strains expressing catalytically inactive IMPDH displayed only a mild virulence defect. Collectively these observations question the vulnerability of the enzymatic activity of IMPDH as a target for the treatment of infections, suggesting other functions of this protein may be responsible for its role in infection.
许多细菌病原体,包括 ,需要肌苷 5'-单磷酸脱氢酶 (IMPDH) 才能感染,这使得该酶成为抗生素的一个有前途的新靶点。尽管已经报道了有效的细菌 IMPDH 选择性抑制剂,但具有抗菌活性的相对较少。在这里,我们使用结构导向设计获得了具有强大抗菌活性(最小抑菌浓度小于 2 μM)和低哺乳动物细胞细胞毒性的 IMPDH(IMPDH)抑制剂。最活跃化合物的物理化学性质在典型的 Lipinski/Veber 空间内,这表明极性不是实现抗菌活性的一般要求。有五种化合物在败血症和脓肿感染的小鼠模型中未能显示出活性。抑制剂抗性 菌株很容易出现。抗性源于 IMPDH 辅因子/抑制剂结合位点的取代,证实了针对目标的抗菌活性。这些突变降低了所有测试抑制剂的结合,但也降低了催化活性。尽管如此,抗性菌株的毒力与野生型细菌相当。令人惊讶的是,表达无催化活性 IMPDH 的菌株仅表现出轻微的毒力缺陷。总的来说,这些观察结果质疑了 IMPDH 的酶活性作为 感染治疗靶点的脆弱性,这表明该蛋白的其他功能可能与其在感染中的作用有关。