柠檬酸杆菌抑制肠道腔中鼠柠檬酸杆菌的生长。
Citrobacter amalonaticus Inhibits the Growth of Citrobacter rodentium in the Gut Lumen.
机构信息
Centre for Molecular Microbiology and Infection, Department of Life Sciences, Imperial College, London, United Kingdom.
Microbiome Informatics Team, EMBL-EBI, Hinxton, United Kingdom.
出版信息
mBio. 2021 Oct 26;12(5):e0241021. doi: 10.1128/mBio.02410-21. Epub 2021 Oct 5.
The gut microbiota plays a crucial role in susceptibility to enteric pathogens, including Citrobacter rodentium, a model extracellular mouse pathogen that colonizes the colonic mucosa. C. rodentium infection outcomes vary between mouse strains, with C57BL/6 and C3H/HeN mice clearing and succumbing to the infection, respectively. Kanamycin (Kan) treatment at the peak of C57BL/6 mouse infection with Kan-resistant C. rodentium resulted in relocalization of the pathogen from the colonic mucosa and cecum to solely the cecal luminal contents; cessation of the Kan treatment resulted in rapid clearance of the pathogen. We now show that in C3H/HeN mice, following Kan-induced displacement of C. rodentium to the cecum, the pathogen stably colonizes the cecal lumens of 65% of the mice in the absence of continued antibiotic treatment, a phenomenon that we term antibiotic-induced bacterial commensalization (AIBC). AIBC C. rodentium was well tolerated by the host, which showed few signs of inflammation; passaged AIBC C. rodentium robustly infected naive C3H/HeN mice, suggesting that the AIBC state is transient and did not select for genetically avirulent C. rodentium mutants. Following withdrawal of antibiotic treatment, 35% of C3H/HeN mice were able to prevent C. rodentium commensalization in the gut lumen. These mice presented a bloom of a commensal species, Citrobacter amalonaticus, which inhibited the growth of C. rodentium in a contact-dependent manner and the luminal growth of AIBC C. rodentium . Overall, our data suggest that commensal species can confer colonization resistance to closely related pathogenic species. Gut bacterial infections involve three-way interactions between virulence factors, the host immune responses, and the microbiome. While the microbiome erects colonization resistance barriers, pathogens employ virulence factors to overcome them. Treating mice infected with kanamycin-resistant Citrobacter rodentium with kanamycin caused displacement of the pathogen from the colonic mucosa to the cecal lumen. Following withdrawal of the kanamycin treatment, 65% of the mice were persistently colonized by C. rodentium, which seemed to downregulate virulence factor expression. In this model of luminal gut colonization, 35% of mice were refractory to stable C. rodentium colonization, suggesting that their microbiotas were able to confer colonization resistance. We identify a commensal bacterium of the genus, , which inhibits C. rodentium growth and . These results show that the line separating commensal and pathogenic lifestyles is thin and multifactorial and that commensals may play a major role in combating enteric infection.
肠道微生物群在易感性方面起着至关重要的作用,包括柠檬酸杆菌,一种在结肠黏膜定植的模型外肠道病原体。柠檬酸杆菌感染的结果在不同的小鼠品系之间存在差异,C57BL/6 和 C3H/HeN 小鼠分别清除和感染该病原体。在 C57BL/6 小鼠感染耐卡那霉素的柠檬酸杆菌达到高峰时,用卡那霉素治疗会导致病原体从结肠黏膜和盲肠重新定位到仅盲肠腔内内容物中;停止卡那霉素治疗会导致病原体迅速清除。我们现在表明,在 C3H/HeN 小鼠中,在用卡那霉素诱导柠檬酸杆菌移位到盲肠后,在没有持续抗生素治疗的情况下,病原体稳定地定植于 65%的小鼠盲肠腔内,我们将这种现象称为抗生素诱导的细菌共生(AIBC)。AIBC 柠檬酸杆菌被宿主很好地耐受,宿主很少有炎症迹象;传代的 AIBC 柠檬酸杆菌可强烈感染未感染的 C3H/HeN 小鼠,这表明 AIBC 状态是短暂的,并未选择基因不致病的柠檬酸杆菌突变体。在停止抗生素治疗后,35%的 C3H/HeN 小鼠能够防止柠檬酸杆菌在肠道腔内共生。这些小鼠表现出一种共生种,柠檬酸杆菌的大量繁殖,该共生种以接触依赖性方式抑制柠檬酸杆菌的生长,并且抑制 AIBC 柠檬酸杆菌的腔内生长。总体而言,我们的数据表明共生种可以赋予密切相关的致病种定植抗性。肠道细菌感染涉及毒力因子、宿主免疫反应和微生物组之间的三方相互作用。虽然微生物组建立了定植抗性屏障,但病原体利用毒力因子来克服它们。用卡那霉素治疗感染耐卡那霉素的柠檬酸杆菌会导致病原体从结肠黏膜移位到盲肠腔。在停止卡那霉素治疗后,65%的小鼠被柠檬酸杆菌持续定植,这似乎下调了毒力因子的表达。在这种肠道腔内定植的模型中,35%的小鼠对稳定的柠檬酸杆菌定植具有抗性,这表明它们的微生物组能够赋予定植抗性。我们鉴定出一种属的共生菌,它抑制柠檬酸杆菌的生长和定植。这些结果表明,共生和致病生活方式之间的界限是模糊的和多因素的,并且共生菌可能在对抗肠道感染方面发挥重要作用。