• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

测量推动了用于生物系统精确工程的定向进化的进展。

Measurements drive progress in directed evolution for precise engineering of biological systems.

作者信息

Tack Drew S, Romantseva Eugenia F, Tonner Peter D, Pressman Abe, Rammohan Jayan, Strychalski Elizabeth A

机构信息

National Institute of Standards and Technology, Gaithersburg, MD, 20898, USA.

出版信息

Curr Opin Syst Biol. 2020 Oct;23:32-37. doi: 10.1016/j.coisb.2020.09.004. Epub 2020 Sep 20.

DOI:10.1016/j.coisb.2020.09.004
PMID:34611570
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8489032/
Abstract

Precise engineering of biological systems requires quantitative, high-throughput measurements, exemplified by progress in directed evolution. New approaches allow high-throughput measurements of phenotypes and their corresponding genotypes. When integrated into directed evolution, these quantitative approaches enable the precise engineering of biological function. At the same time, the increasingly routine availability of large, high-quality data sets supports the integration of machine learning with directed evolution. Together, these advances herald striking capabilities for engineering biology.

摘要

生物系统的精确工程需要定量的高通量测量,定向进化的进展就是例证。新方法允许对表型及其相应基因型进行高通量测量。当整合到定向进化中时,这些定量方法能够实现生物功能的精确工程。与此同时,越来越常规可得的大规模高质量数据集支持机器学习与定向进化的整合。这些进展共同预示着工程生物学将具备惊人的能力。

相似文献

1
Measurements drive progress in directed evolution for precise engineering of biological systems.测量推动了用于生物系统精确工程的定向进化的进展。
Curr Opin Syst Biol. 2020 Oct;23:32-37. doi: 10.1016/j.coisb.2020.09.004. Epub 2020 Sep 20.
2
Learning Strategies in Protein Directed Evolution.蛋白质定向进化中的学习策略。
Methods Mol Biol. 2022;2461:225-275. doi: 10.1007/978-1-0716-2152-3_15.
3
Engineering highly active nuclease enzymes with machine learning and high-throughput screening.利用机器学习和高通量筛选技术设计高活性核酸酶
Cell Syst. 2025 Mar 19;16(3):101236. doi: 10.1016/j.cels.2025.101236. Epub 2025 Mar 12.
4
In vitro continuous protein evolution empowered by machine learning and automation.基于机器学习和自动化的体外连续蛋白质进化。
Cell Syst. 2023 Aug 16;14(8):633-644. doi: 10.1016/j.cels.2023.04.006. Epub 2023 May 23.
5
Optimisation strategies for directed evolution without sequencing.无需测序的定向进化优化策略。
PLoS Comput Biol. 2024 Dec 19;20(12):e1012695. doi: 10.1371/journal.pcbi.1012695. eCollection 2024 Dec.
6
Directed evolution and synthetic biology applications to microbial systems.定向进化与合成生物学在微生物系统中的应用。
Curr Opin Biotechnol. 2016 Jun;39:126-133. doi: 10.1016/j.copbio.2016.03.016. Epub 2016 Apr 4.
7
Machine learning to navigate fitness landscapes for protein engineering.机器学习在蛋白质工程中的应用:探索适应度景观
Curr Opin Biotechnol. 2022 Jun;75:102713. doi: 10.1016/j.copbio.2022.102713. Epub 2022 Apr 9.
8
Protease engineering: Approaches, tools, and emerging trends.蛋白酶工程:方法、工具及新趋势
Biotechnol Adv. 2025 Sep;82:108602. doi: 10.1016/j.biotechadv.2025.108602. Epub 2025 May 12.
9
Fitness Landscapes and Evolution of Catalytic RNA.适应性景观与催化 RNA 的进化。
Annu Rev Biophys. 2024 Jul;53(1):109-125. doi: 10.1146/annurev-biophys-030822-025038.
10
Machine-learning-guided directed evolution for protein engineering.基于机器学习的定向进化蛋白质工程。
Nat Methods. 2019 Aug;16(8):687-694. doi: 10.1038/s41592-019-0496-6. Epub 2019 Jul 15.

本文引用的文献

1
The genotype-phenotype landscape of an allosteric protein.变构蛋白的基因型-表型图谱
Mol Syst Biol. 2021 Dec;17(12):e10847. doi: 10.15252/msb.202110847.
2
Sparse estimation of mutual information landscapes quantifies information transmission through cellular biochemical reaction networks.稀疏互信息景观估计量化了通过细胞生化反应网络的信息传递。
Commun Biol. 2020 Apr 30;3(1):203. doi: 10.1038/s42003-020-0901-9.
3
Model-driven generation of artificial yeast promoters.基于模型的人工酵母启动子生成。
Nat Commun. 2020 Apr 30;11(1):2113. doi: 10.1038/s41467-020-15977-4.
4
Developing a new class of engineered live bacterial therapeutics to treat human diseases.开发一类新型工程活菌疗法药物,用于治疗人类疾病。
Nat Commun. 2020 Apr 8;11(1):1738. doi: 10.1038/s41467-020-15508-1.
5
Directed evolution improves the catalytic efficiency of TEV protease.定向进化提高 TEV 蛋白酶的催化效率。
Nat Methods. 2020 Feb;17(2):167-174. doi: 10.1038/s41592-019-0665-7. Epub 2019 Dec 9.
6
MaveDB: an open-source platform to distribute and interpret data from multiplexed assays of variant effect.MaveDB:一个开源平台,用于分发和解释来自变异效应多重分析的数据。
Genome Biol. 2019 Nov 4;20(1):223. doi: 10.1186/s13059-019-1845-6.
7
Unified rational protein engineering with sequence-based deep representation learning.基于序列的深度学习表示的统一理性蛋白质工程。
Nat Methods. 2019 Dec;16(12):1315-1322. doi: 10.1038/s41592-019-0598-1. Epub 2019 Oct 21.
8
Machine-learning-guided directed evolution for protein engineering.基于机器学习的定向进化蛋白质工程。
Nat Methods. 2019 Aug;16(8):687-694. doi: 10.1038/s41592-019-0496-6. Epub 2019 Jul 15.
9
Building a global alliance of biofoundries.建立全球生物铸造厂联盟。
Nat Commun. 2019 May 9;10(1):2040. doi: 10.1038/s41467-019-10079-2.
10
Absolute quantification of translational regulation and burden using combined sequencing approaches.使用组合测序方法进行翻译调控和负担的绝对定量。
Mol Syst Biol. 2019 May 3;15(5):e8719. doi: 10.15252/msb.20188719.