Antar Hammam, Soh Young-Min, Zamuner Stefano, Bock Florian P, Anchimiuk Anna, Rios Paolo De Los, Gruber Stephan
Department of Fundamental Microbiology (DMF), Faculty of Biology and Medicine (FBM), University of Lausanne, 1015 Lausanne, Switzerland.
Laboratory of Statistical Biophysics, Institute of Physics, School of Basic Sciences and Institute of Bioengineering, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.
Sci Adv. 2021 Oct 8;7(41):eabj2854. doi: 10.1126/sciadv.abj2854. Epub 2021 Oct 6.
Three-component ParABS systems are widely distributed factors for plasmid partitioning and chromosome segregation in bacteria. ParB acts as adaptor protein between the 16–base pair centromeric DNA sequences and the DNA segregation proteins ParA and Smc (structural maintenance of chromosomes). Upon cytidine triphosphate (CTP) and DNA binding, ParB dimers form DNA clamps that spread onto -flanking DNA by sliding, thus assembling the so-called partition complex. We show here that CTP hydrolysis is essential for efficient chromosome segregation by ParABS but largely dispensable for Smc recruitment. Our results suggest that CTP hydrolysis contributes to partition complex assembly via two mechanisms. It promotes ParB unloading from DNA to limit the extent of ParB spreading, and it recycles off-target ParB clamps to allow for retargeting, together superconcentrating ParB near . We also propose a model for clamp closure involving a steric clash when binding ParB protomers to opposing half sites.
三组分ParABS系统是细菌中质粒分配和染色体分离的广泛分布因子。ParB作为16碱基对着丝粒DNA序列与DNA分离蛋白ParA和Smc(染色体结构维持蛋白)之间的衔接蛋白。在三磷酸胞苷(CTP)和DNA结合后,ParB二聚体形成DNA夹子,通过滑动扩散到侧翼DNA上,从而组装所谓的分配复合物。我们在此表明,CTP水解对于ParABS高效的染色体分离至关重要,但对于Smc募集在很大程度上是可有可无的。我们的结果表明,CTP水解通过两种机制促进分配复合物的组装。它促进ParB从DNA上卸载以限制ParB扩散的程度,并回收脱靶的ParB夹子以允许重新靶向,共同使ParB在附近超浓缩。我们还提出了一个夹子闭合模型,该模型涉及在将ParB原聚体结合到相对的半位点时的空间冲突。