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.的完整叶绿体基因组序列

The complete chloroplast genome sequence of .

作者信息

Zhang Jiaji, Weng Yuhao, Ye Daiquan, You Yunfei, Shi Jisen, Chen Jinhui

机构信息

Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China.

National Germplasm Bank of Chinese fir at Fujian Yangkou Forest Farm, Nanping, China.

出版信息

Mitochondrial DNA B Resour. 2021 Oct 1;6(10):3046-3048. doi: 10.1080/23802359.2021.1967803. eCollection 2021.

DOI:10.1080/23802359.2021.1967803
PMID:34621982
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8491724/
Abstract

, as windbreaks, soil erosion, and sand dune stabilization with high resistant to typhoon force winds, drought and salinization, belongs to the Casuarinaceae family. In this study, the complete chloroplast genome of was sequenced by Illumina sequencing platform and annotated by Geneious Prime. The complete chloroplast genome size is 156,128 bp in length, with a large single copy region (LSC: 86,192 bp) and a small single-copy region (SSC: 18,462 bp), which was separated by a pair of 25,737 bp inverted repeated regions (IRs). The chloroplast genome of encodes total 127 genes, including 82 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenomic relationship analysis suggested that the Casuarinaceae family, which includes , was more closely related to the family of Betulaceae.

摘要

作为防风林,具有抗台风风力、耐旱和耐盐渍化能力,可防止土壤侵蚀和稳定沙丘,属于木麻黄科。在本研究中,通过Illumina测序平台对其完整叶绿体基因组进行测序,并使用Geneious Prime进行注释。完整叶绿体基因组长度为156,128 bp,有一个大单拷贝区域(LSC:86,192 bp)和一个小单拷贝区域(SSC:18,462 bp),由一对25,737 bp的反向重复区域(IRs)分隔。其叶绿体基因组共编码127个基因,包括82个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育关系分析表明,包括该物种在内的木麻黄科与桦木科的关系更为密切。

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