Zhirnov Oleg
Gamaleya Microbiology and Epidemiology Research Center, Ivanovsky Institute of Virology, Moscow 123098, Russia.
World J Virol. 2021 Sep 25;10(5):256-263. doi: 10.5501/wjv.v10.i5.256.
Influenza viruses and coronaviruses have linear single-stranded RNA genomes with negative and positive sense polarities and genes encoded in viral genomes are expressed in these viruses as positive and negative genes, respectively. Here we consider a novel gene identified in viral genomes in opposite direction, as positive in influenza and negative in coronaviruses, suggesting an ambisense genome strategy for both virus families. Noteworthy, the identified novel genes colocolized in the same RNA regions of viral genomes, where the previously known opposite genes are encoded, a so-called ambisense stacking architecture of genes in virus genome. It seems likely, that ambisense gene stacking in influenza and coronavirus families significantly increases genetic potential and virus diversity to extend virus-host adaptation pathways in nature. These data imply that ambisense viruses may have a multivirion mechanism, like "a dark side of the Moon", allowing production of the heterogeneous population of virions expressed through positive and negative sense genome strategies.
流感病毒和冠状病毒具有线性单链RNA基因组,分别具有负链和正链极性,病毒基因组中编码的基因在这些病毒中分别以正链基因和负链基因的形式表达。在此,我们考虑在病毒基因组中以相反方向鉴定出的一个新基因,在流感病毒中为正链,在冠状病毒中为负链,这表明这两个病毒家族都采用了双义基因组策略。值得注意的是,鉴定出的新基因共定位于病毒基因组的相同RNA区域,该区域编码先前已知的相反链基因,这是病毒基因组中一种所谓的双义基因堆叠结构。流感病毒和冠状病毒家族中的双义基因堆叠似乎很可能显著增加遗传潜力和病毒多样性,从而在自然界中扩展病毒-宿主适应途径。这些数据表明,双义病毒可能具有一种多病毒体机制,就像“月球的暗面”,允许通过正链和负链基因组策略产生异质性病毒粒子群体。