Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, Texas, United States of America.
Department of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, Texas, United States of America.
PLoS One. 2021 Oct 12;16(10):e0257628. doi: 10.1371/journal.pone.0257628. eCollection 2021.
Mediation analysis is a statistical method for evaluating the direct and indirect effects of an exposure on an outcome in the presence of a mediator. Mediation models have been widely used to determine direct and indirect contributions of genetic variants in clinical phenotypes. In genetic studies, the additive genetic model is the most commonly used model because it can detect effects from either recessive or dominant models (or any model in between). However, the existing approaches for mediation model cannot be directly applied when the genetic model is additive (e.g. the most commonly used model for SNPs) or categorical (e.g. polymorphic loci), and thus modification to measures of indirect and direct effects is warranted. In this study, we proposed overall measures of indirect, direct, and total effects for a mediation model with a categorical exposure and a censored mediator, which accounts for the frequency of different values of the categorical exposure. The proposed approach provides the overall contribution of the categorical exposure to the outcome variable. We assessed the empirical performance of the proposed overall measures via simulation studies and applied the measures to evaluate the mediating effect of a women's age at menopause on the association between genetic variants and type 2 diabetes.
中介分析是一种在存在中介的情况下评估暴露对结果的直接和间接影响的统计方法。中介模型已广泛用于确定临床表型中遗传变异的直接和间接贡献。在遗传研究中,加性遗传模型是最常用的模型,因为它可以检测到隐性或显性模型(或两者之间的任何模型)的影响。然而,当遗传模型为加性(例如,SNP 最常用的模型)或分类(例如,多态性位点)时,现有的中介模型方法不能直接应用,因此需要对间接和直接效应的度量进行修正。在这项研究中,我们提出了一种具有分类暴露和截尾中介的中介模型的间接、直接和总效应的综合度量方法,该方法考虑了分类暴露的不同值的频率。所提出的方法提供了分类暴露对结果变量的总体贡献。我们通过模拟研究评估了所提出的综合度量的经验性能,并应用这些度量来评估女性绝经年龄对遗传变异与 2 型糖尿病之间关联的中介效应。