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未经处理的全牛血液中,mRNA 能稳定存在多久?

How long does the mRNA remains stable in untreated whole bovine blood?

机构信息

Instituto de Zootecnia, Rua Heitor Penteado, n. 56, Nova Odessa, São Paulo, 13380 011, Brazil.

Universidade Estadual Júlio de Mesquita Filho, Unesp, Jaboticabal, São Paulo, 14884‑900, Brazil.

出版信息

Mol Biol Rep. 2022 Jan;49(1):789-795. doi: 10.1007/s11033-021-06808-w. Epub 2021 Oct 16.

Abstract

BACKGROUND

High quality and quantity of messenger RNA (mRNA) are required for accuracy of gene expression studies and other RNA-based downstream applications. Since RNA is considered a labile macromolecular prone to degradation, which may result in falsely altered gene expression patterns, several commercial stabilizing reagents have been developed aiming to keep RNA stable for long period. However, for studies involving large number of experimental samples, the high costs related to these specific reagents may constitute a barrier.

METHODS AND RESULTS

In this context the present study was designed aiming to evaluate the stability of mRNA in whole bovine blood collected in EDTA tubes during storage at common fridge (4 °C). Whole blood samples were collected from six Holstein calves and submitted to RNA extraction in each different interval: immediately after blood sampling (< 2 h), at 1-day post-sampling (dps), 2 dps, 3 dps, 7 dps and 14dps intervals. RNA integrity and purity were evaluated, and RT-qPCR assays were run using seven different genes (B2M, ACTB, PPIA, GAPDH, YWHAZ, CD4 and IFN-γ) aiming to evaluate the presence of altered gene transcription during storage. All extracted RNA samples presented high purity, while optimal integrity and unaltered gene expression were observed in whole experimental group up to 3 days of storage.

CONCLUSION

Bovine blood RNA remained stable in K3EDTA tubes for 3 days stored at common fridge and can be successfully and accurately used for gene expression studies.

摘要

背景

信使 RNA(mRNA)的高质量和数量是基因表达研究和其他基于 RNA 的下游应用准确性的关键。由于 RNA 被认为是一种不稳定的易降解的大分子,这可能导致基因表达模式的错误改变,因此已经开发了几种商业稳定试剂,旨在使 RNA 长期稳定。然而,对于涉及大量实验样本的研究来说,这些特定试剂的高成本可能构成一个障碍。

方法和结果

在这种情况下,本研究旨在评估 EDTA 管中收集的全牛血液中的 mRNA 在常见冰箱(4°C)储存期间的稳定性。从六头荷斯坦小牛中采集全血样本,并在每个不同的间隔进行 RNA 提取:采血后立即(<2 小时)、采血后 1 天(dps)、2 dps、3 dps、7 dps 和 14 dps。评估 RNA 的完整性和纯度,并使用七种不同的基因(B2M、ACTB、PPIA、GAPDH、YWHAZ、CD4 和 IFN-γ)进行 RT-qPCR 检测,以评估在储存过程中基因转录是否发生改变。所有提取的 RNA 样本均表现出高纯度,而在 3 天的储存期内,整个实验组的 RNA 完整性和未改变的基因表达均最佳。

结论

在普通冰箱中,K3EDTA 管中的牛血 RNA 在 3 天内保持稳定,可成功且准确地用于基因表达研究。

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