• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

定向网络拉普拉斯算子与随机图模型。

Directed network Laplacians and random graph models.

作者信息

Gong Xue, Higham Desmond J, Zygalakis Konstantinos

机构信息

School of Mathematics, University of Edinburgh, Edinburgh EH9 3FD, UK.

The Maxwell Institute for Mathematical Sciences, Edinburgh EH8 9BT, UK.

出版信息

R Soc Open Sci. 2021 Oct 13;8(10):211144. doi: 10.1098/rsos.211144. eCollection 2021 Oct.

DOI:10.1098/rsos.211144
PMID:34659784
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8511780/
Abstract

We consider spectral methods that uncover hidden structures in directed networks. We establish and exploit connections between node reordering via (a) minimizing an objective function and (b) maximizing the likelihood of a random graph model. We focus on two existing spectral approaches that build and analyse Laplacian-style matrices via the minimization of frustration and trophic incoherence. These algorithms aim to reveal directed periodic and linear hierarchies, respectively. We show that reordering nodes using the two algorithms, or mapping them onto a specified lattice, is associated with new classes of directed random graph models. Using this random graph setting, we are able to compare the two algorithms on a given network and quantify which structure is more likely to be present. We illustrate the approach on synthetic and real networks, and discuss practical implementation issues.

摘要

我们考虑用于揭示有向网络中隐藏结构的谱方法。我们建立并利用了通过(a)最小化目标函数和(b)最大化随机图模型的似然性来进行节点重新排序之间的联系。我们专注于两种现有的谱方法,它们通过最小化挫折感和营养不连贯性来构建和分析拉普拉斯风格的矩阵。这些算法分别旨在揭示有向周期层次结构和线性层次结构。我们表明,使用这两种算法对节点进行重新排序,或将它们映射到指定的晶格上,与新的有向随机图模型类别相关联。在这种随机图设置下,我们能够在给定网络上比较这两种算法,并量化哪种结构更有可能存在。我们在合成网络和真实网络上说明了该方法,并讨论了实际实现问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/6195cacfb9d6/rsos211144f09.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/eb38211de3e1/rsos211144f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/4ff7edd72425/rsos211144f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/41049ef79026/rsos211144f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/56c5f3a01792/rsos211144f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/4bea6f45d58f/rsos211144f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/0e3a4859c7b8/rsos211144f06.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/f8bdc564cd68/rsos211144f07.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/3beb6ea0661b/rsos211144f08.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/6195cacfb9d6/rsos211144f09.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/eb38211de3e1/rsos211144f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/4ff7edd72425/rsos211144f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/41049ef79026/rsos211144f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/56c5f3a01792/rsos211144f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/4bea6f45d58f/rsos211144f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/0e3a4859c7b8/rsos211144f06.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/f8bdc564cd68/rsos211144f07.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/3beb6ea0661b/rsos211144f08.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24d9/8511780/6195cacfb9d6/rsos211144f09.jpg

相似文献

1
Directed network Laplacians and random graph models.定向网络拉普拉斯算子与随机图模型。
R Soc Open Sci. 2021 Oct 13;8(10):211144. doi: 10.1098/rsos.211144. eCollection 2021 Oct.
2
A spectral graph convolution for signed directed graphs via magnetic Laplacian.基于磁拉普拉斯的有向符号图的谱图卷积。
Neural Netw. 2023 Jul;164:562-574. doi: 10.1016/j.neunet.2023.05.009. Epub 2023 May 12.
3
Graphlet Laplacians for topology-function and topology-disease relationships.图元拉普拉斯在拓扑-功能和拓扑-疾病关系中的应用。
Bioinformatics. 2019 Dec 15;35(24):5226-5234. doi: 10.1093/bioinformatics/btz455.
4
Deep semi-supervised learning via dynamic anchor graph embedding in latent space.基于潜在空间动态锚图嵌入的深度半监督学习。
Neural Netw. 2022 Feb;146:350-360. doi: 10.1016/j.neunet.2021.11.026. Epub 2021 Dec 1.
5
An efficient supply management in water flow network using graph spectral techniques.一种使用图谱技术的水流网络高效供应管理方法。
Environ Sci Pollut Res Int. 2023 Jan;30(2):2530-2543. doi: 10.1007/s11356-022-22335-y. Epub 2022 Aug 6.
6
Generative hypergraph models and spectral embedding.生成超图模型和谱嵌入。
Sci Rep. 2023 Jan 11;13(1):540. doi: 10.1038/s41598-023-27565-9.
7
Spectral Clustering via sparse graph structure learning with application to Proteomic Signaling Networks in Cancer.通过稀疏图结构学习实现的谱聚类及其在癌症蛋白质组信号网络中的应用
Comput Stat Data Anal. 2019 Apr;132:46-69. doi: 10.1016/j.csda.2018.08.009. Epub 2018 Aug 23.
8
Node similarity-based graph convolution for link prediction in biological networks.基于节点相似度的生物网络链路预测图卷积
Bioinformatics. 2021 Dec 7;37(23):4501-4508. doi: 10.1093/bioinformatics/btab464.
9
Intrinsic graph structure estimation using graph Laplacian.使用图拉普拉斯算子进行内在图结构估计。
Neural Comput. 2014 Jul;26(7):1455-83. doi: 10.1162/NECO_a_00603. Epub 2014 Apr 7.
10
Spectral detection of simplicial communities via Hodge Laplacians.通过霍奇拉普拉斯算子对单纯复形群落进行光谱检测。
Phys Rev E. 2021 Dec;104(6-1):064303. doi: 10.1103/PhysRevE.104.064303.

引用本文的文献

1
Generative hypergraph models and spectral embedding.生成超图模型和谱嵌入。
Sci Rep. 2023 Jan 11;13(1):540. doi: 10.1038/s41598-023-27565-9.

本文引用的文献

1
Graph hierarchy: a novel framework to analyse hierarchical structures in complex networks.图层次结构:分析复杂网络中层次结构的新框架。
Sci Rep. 2021 Jul 6;11(1):13943. doi: 10.1038/s41598-021-93161-4.
2
How directed is a directed network?有向网络的定向程度如何?
R Soc Open Sci. 2020 Sep 9;7(9):201138. doi: 10.1098/rsos.201138. eCollection 2020 Sep.
3
Rationing social contact during the COVID-19 pandemic: Transmission risk and social benefits of US locations.在 COVID-19 大流行期间配给社会接触:美国地点的传播风险和社会效益。
Proc Natl Acad Sci U S A. 2020 Jun 30;117(26):14642-14644. doi: 10.1073/pnas.2008025117. Epub 2020 Jun 10.
4
Magnetic eigenmaps for community detection in directed networks.
Phys Rev E. 2017 Feb;95(2-1):022302. doi: 10.1103/PhysRevE.95.022302. Epub 2017 Feb 8.
5
Higher-order organization of complex networks.复杂网络的高阶组织
Science. 2016 Jul 8;353(6295):163-6. doi: 10.1126/science.aad9029.
6
Angular Synchronization by Eigenvectors and Semidefinite Programming.基于特征向量和半定规划的角度同步
Appl Comput Harmon Anal. 2011 Jan 30;30(1):20-36. doi: 10.1016/j.acha.2010.02.001.
7
Clustering by passing messages between data points.通过在数据点之间传递信息进行聚类。
Science. 2007 Feb 16;315(5814):972-6. doi: 10.1126/science.1136800. Epub 2007 Jan 11.
8
Finding community structure in networks using the eigenvectors of matrices.利用矩阵特征向量在网络中寻找社区结构。
Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Sep;74(3 Pt 2):036104. doi: 10.1103/PhysRevE.74.036104. Epub 2006 Sep 11.
9
Nonoptimal component placement, but short processing paths, due to long-distance projections in neural systems.由于神经系统中的长距离投射,组件放置不理想,但处理路径较短。
PLoS Comput Biol. 2006 Jul 21;2(7):e95. doi: 10.1371/journal.pcbi.0020095. Epub 2006 Jun 8.
10
Range-dependent random graphs and their application to modeling large small-world Proteome datasets.
Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Dec;66(6 Pt 2):066702. doi: 10.1103/PhysRevE.66.066702. Epub 2002 Dec 10.