College of Horticulture and Landscape Architecture, Southwest University, No. 2 Tiansheng Road, Beibei District, Chongqing, 400716, China.
College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Planta. 2021 Oct 19;254(5):99. doi: 10.1007/s00425-021-03753-7.
Six Mazaceae plastomes were assembled in this study, including the newly recognized genus, Puchiumazus. Comparative plastid genomic analysis provided new insights into Mazaceae. The phylogenetic categorization of Mazus lanceifolius (Mazaceae) has long been uncertain. In 2021, the scholars Bo Li, D. G. Zhang, and C. L. Xiang republished M. lanceifolius as a new species Puchiumazus lanceifolius, within a new genus Puchiumazus. However, there is little plastome information on Mazaceae. Following the publishing of the new genus Puchiumazus, it is now necessary to study the Mazaceae plastome features to comprehensively understand this young family. The Mazaceae plastomes all have a typical quartile structure. The plastomes have a size ranging from 152,388 to 154,252 bp, and each plastome contains 112 unique genes, including 78 protein-coding genes, 4 rRNA genes, and 30 tRNA genes. A comparative analysis showed that these plastome sequences are highly conserved. Furthermore, we identified four relatively hypervariable regions (trnQ-UUC-psbK, trnS-GCU- trnS-CGA, trnT-UGU-trnL-UAA and ycf1) that can be used as potential DNA barcodes for the identification of this clade. Phylogenetic relationships based on the whole plastome sequences of 25 samples of 14 genera of Lamiales placed M. lanceifolius in the basal clade of the family Mazaceae, with 100% bootstrap support. In summary, the M. lanceifolius results indicate that a new monotype genus (Puchiumazus) should be established at the whole-plastome level. This study provides plastid genomic resources for exploring the phylogeny of Mazaceae.
本研究共组装了六个樟科植物的质体基因组,其中包括新认可的属——蒲翠木属。质体基因组比较分析为樟科植物提供了新的见解。对于披针叶野扇花(樟科)的系统分类归属一直存在不确定性。2021 年,学者 Bo Li、D.G. Zhang 和 C.L. Xiang 将披针叶野扇花重新归类为新种——蒲翠木属的披针叶野扇花。然而,关于樟科植物的质体基因组信息较少。在新属蒲翠木属发表后,现在有必要研究樟科植物的质体基因组特征,以全面了解这个年轻的家族。樟科植物的质体基因组均具有典型的四联体结构。质体基因组大小在 152388 到 154252bp 之间,每个质体基因组包含 112 个独特基因,包括 78 个蛋白质编码基因、4 个 rRNA 基因和 30 个 tRNA 基因。比较分析表明,这些质体基因组序列高度保守。此外,我们鉴定了四个相对高变区(trnQ-UUC-psbK、trnS-GCU-trnS-CGA、trnT-UGU-trnL-UAA 和 ycf1),可作为该分支的潜在 DNA 条形码用于鉴定。基于 25 个 Lamiales 科 14 个属的 25 个样本的全质体序列构建的系统发育关系将披针叶野扇花置于樟科的基部分支,具有 100%的自举支持率。总之,披针叶野扇花的研究结果表明,应该在整个质体基因组水平上建立一个新的单型属(蒲翠木属)。本研究为樟科植物的系统发育研究提供了质体基因组资源。