Suppr超能文献

针对 的新型多表位嵌合疫苗,模拟强烈免疫应答和保护作用

Towards A Novel Multi-Epitopes Chimeric Vaccine for Simulating Strong Immune Responses and Protection against .

机构信息

Department of Health and Biological Sciences, Abasyn University, Peshawar 25000, Pakistan.

Department of Biological Sciences, National University of Medical Sciences, Rawalpindi 46000, Pakistan.

出版信息

Int J Environ Res Public Health. 2021 Oct 19;18(20):10961. doi: 10.3390/ijerph182010961.

Abstract

is one of the main etiological agents of hospital-acquired infections and no licensed vaccine is available against the pathogen. Herein, we designed a multi-epitope-based vaccine against . Predicted proteins from fully sequenced genomes of the pathogen were subjected to a core sequences analysis, followed by the prioritization of non-redundant, host non-homologous and extracellular, outer membrane and periplasmic membrane virulent proteins as vaccine targets. Five proteins (TonB-dependent siderophore receptor, serralysin family metalloprotease, type 1 fimbrial protein, flagellar hook protein (FlgE), and pilus periplasmic chaperone) were shortlisted for the epitope prediction. The predicted epitopes were checked for antigenicity, toxicity, solubility, and binding affinity with the DRB*0101 allele. The selected epitopes were linked with each other through GPGPG linkers and were joined with the cholera toxin B subunit (CTBS) to boost immune responses. The tertiary structure of the vaccine was modeled and blindly docked with MHC-I, MHC-II, and Toll-like receptors 4 (TLR4). Molecular dynamic simulations of 250 nanoseconds affirmed that the designed vaccine showed stable conformation with the receptors. Further, intermolecular binding free energies demonstrated the domination of both the van der Waals and electrostatic energies. Overall, the results of the current study might help experimentalists to develop a novel vaccine against .

摘要

是医院获得性感染的主要病因之一,目前还没有针对该病原体的许可疫苗。在此,我们针对 设计了一种基于多表位的疫苗。对病原体全序列基因组的预测蛋白进行核心序列分析,然后对非冗余、宿主非同源和细胞外、外膜和周质膜毒力蛋白进行优先级排序,作为疫苗靶标。从 5 种蛋白质(TonB 依赖性铁载体受体、丝氨酸蛋白酶家族金属蛋白酶、1 型菌毛蛋白、鞭毛钩蛋白(FlgE)和菌毛周质膜伴侣)中筛选出短肽用于表位预测。预测的表位经过抗原性、毒性、可溶性和与 DRB*0101 等位基因的结合亲和力检查。选择的表位通过 GPGPG 接头彼此连接,并与霍乱毒素 B 亚单位(CTBS)结合以增强免疫反应。疫苗的三级结构建模并与 MHC-I、MHC-II 和 Toll 样受体 4(TLR4)盲目对接。250 纳秒的分子动力学模拟证实,设计的疫苗与受体具有稳定的构象。此外,分子间结合自由能表明范德华力和静电力都占主导地位。总体而言,本研究的结果可能有助于实验人员开发针对 的新型疫苗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0cc6/8535705/a8cf2e3ba295/ijerph-18-10961-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验