González-Bacerio Jorge, Arocha Irina, Aguado Mirtha Elisa, Méndez Yanira, Marsiccobetre Sabrina, Izquierdo Maikel, Rivera Daniel G, Figarella Katherine, Uzcátegui Néstor L
Department of Biochemistry, Faculty of Biology, University of Havana, Havana 10400, Cuba.
Center for Protein Studies, Faculty of Biology, University of Havana, Havana 10400, Cuba.
Life (Basel). 2021 Oct 1;11(10):1037. doi: 10.3390/life11101037.
Chagas disease, caused by the kinetoplastid parasite , is a human tropical illness mainly present in Latin America. The therapies available against this disease are far from ideal. Proteases from pathogenic protozoan have been considered as good drug target candidates. acidic M17 leucyl-aminopeptidase (TcLAP) mediates the major parasite's leucyl-aminopeptidase activity and is expressed in all parasite stages. Here, we report the inhibition of TcLAP (IC = 66.0 ± 13.5 µM) by the bestatin-like peptidomimetic KBE009. This molecule also inhibited the proliferation of epimastigotes in vitro (EC = 28.1 ± 1.9 µM) and showed selectivity for the parasite over human dermal fibroblasts (selectivity index: 4.9). Further insight into the specific effect of KBE009 on was provided by docking simulation using the crystal structure of TcLAP and a modeled human orthologous, hLAP3. The TcLAP-KBE009 complex is more stable than its hLAP3 counterpart. KBE009 adopted a better geometrical shape to fit into the active site of TcLAP than that of hLAP3. The drug-likeness and lead-likeness in silico parameters of KBE009 are satisfactory. Altogether, our results provide an initial insight into KBE009 as a promising starting point compound for the rational design of drugs through further optimization.
恰加斯病由动质体寄生虫引起,是一种主要出现在拉丁美洲的人类热带疾病。针对这种疾病的现有疗法远非理想。致病原生动物的蛋白酶已被视为良好的药物靶点候选物。酸性M17亮氨酰氨肽酶(TcLAP)介导主要寄生虫的亮氨酰氨肽酶活性,并在寄生虫的所有阶段表达。在此,我们报告了类抑氨肽酶拟肽KBE009对TcLAP的抑制作用(IC = 66.0 ± 13.5 µM)。该分子还在体外抑制了无鞭毛体的增殖(EC = 28.1 ± 1.9 µM),并且对寄生虫的选择性高于人皮肤成纤维细胞(选择性指数:4.9)。使用TcLAP的晶体结构和建模的人类直系同源物hLAP3进行对接模拟,进一步深入了解了KBE009对 的具体作用。TcLAP-KBE009复合物比其hLAP3对应物更稳定。与hLAP3相比,KBE009采用了更好的几何形状以适合TcLAP的活性位点。KBE009的类药物性和类先导性计算机模拟参数令人满意。总之,我们的结果为KBE009作为通过进一步优化进行药物合理设计的有前途的起始点化合物提供了初步见解。