Skryabin Institute of Biochemistry and Physiology of Microorganisms, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Prospect Nauki 5, 142290, Pushchino, Moscow Region, Russia.
Institute of Cellular and Intracellular Symbiosis of the Ural Branch of the Russian Academy of Sciences, Pionerskaya street, 11, 460000, Orenburg, Russia.
Int J Syst Evol Microbiol. 2021 Oct;71(10). doi: 10.1099/ijsem.0.005068.
A psychrotolerant facultative anaerobe, strain SKBG, was isolated from the bottom sediments of the cold mineral spring Buxichen (Buryatia, Russia). Gram-positive non-motile cocci with a diameter of 1.75-2.5 µm were observed singly or in long chains. Cells grew in the temperature range from ̶ 5-35 °C. Growth was observed within the pH range of 7.0-9.5, with the optimum growth at pH 7.6 and at a NaCl concentration from 0-1.0 % (optimum 0.1 % (w/v)). Strain SKBG was a chemoorganoheterotroph that used sugars and some organic acids as substrates. The predominant fatty acids in cell walls were Сω9, Сω9, and С. The 16S rRNA gene sequence of strain SKBG shared high similarity (>99 %) with those of the type strains of the genus . Digital DNA-DNA hybridization (dDDH) and average nucleotide identity (ANI) values between strain SKBG and Art (=DSM 107162=VKM B-3260) were 70.1 and 95.4 %, respectively. The genomic DNA G+C content of strain SKBG was 47.1 mol%. Compared with the type strain of , the new strain was characterized by a temperature optimum for growth (10 °C) significantly lower than that of DSM 107162 (20-30 °C). Based on phenotypic and genomic characteristics, the isolate SKBG was classified as subsp. subsp. nov. The type strain is SKBG (=VKM B-3241=JCM 33326).
从冷矿泉布克希钦(俄罗斯布里亚特共和国)的底泥中分离到一株嗜冷兼性厌氧菌,菌株 SKBG。观察到革兰氏阳性、非运动性的球菌,直径为 1.75-2.5μm,单独存在或呈长链存在。细胞在 5-35°C 的温度范围内生长。在 pH 值为 7.0-9.5 的范围内观察到生长,在 pH 值为 7.6 和 NaCl 浓度为 0-1.0%(最佳为 0.1%(w/v))时生长最佳。菌株 SKBG 是一种化能有机异养菌,可利用糖和一些有机酸作为底物。细胞壁中的主要脂肪酸为 Сω9、Сω9 和 С。菌株 SKBG 的 16S rRNA 基因序列与属内模式菌株的相似度>99%。菌株 SKBG 与 DSM 107162(VKM B-3260)之间的数字 DNA-DNA 杂交(dDDH)和平均核苷酸同一性(ANI)值分别为 70.1%和 95.4%。菌株 SKBG 的基因组 DNA G+C 含量为 47.1 mol%。与模式菌株相比,新菌株的最适生长温度(10°C)明显低于 DSM 107162(20-30°C)。基于表型和基因组特征,该分离株 SKBG 被分类为 subsp. subsp. nov. 模式菌株为 SKBG(=VKM B-3241=JCM 33326)。