Faculty of Science & Art, Department of Chemistry, Süleyman Demirel University, Isparta, Turkey.
J Biomol Struct Dyn. 2022;40(24):13727-13737. doi: 10.1080/07391102.2021.1993339. Epub 2021 Oct 28.
In this study, a novel Schiff base, 2-[(4-dimethylamino-benzylidene)-amino]-3-(4-hydroxy-phenyl)-propionic acid (DMAT) was synthesized as a result of the condensation reaction of N,N-dimethylamino benzaldehyde and L-tyrosine. The structure of the molecule obtained was characterized by H- and C-NMR, FTIR, UV-Vis spectroscopy and elemental analysis. Density functional theory (DFT) was used to calculate the optimized geometry, vibrational wavenumbers and electronic parameters at the B3LYP level using 6-311 G(d,p) basis set. In addition, H- and C-NMR, FTIR and UV-Vis data of the DMAT molecule were calculated with the same DFT/B3LYP/6-311G(d,p) trinity and the spectra obtained from these calculations were compared to the experimental data. The interactions of the DMAT molecule with vascular endothelial growth factor receptor-2 (VEGFR-2) and β-ketoacyl synthase (KAS III) proteins were investigated by molecular docking studies. The results obtained were then compared with the molecular docking results of the selected drug active substances Regorafenib and Isoniazid molecules. The best interaction was between DMAT-VEGFR-2 with -8.30 and -1586.97 kcal/mol binding energy and full fitness score, respectively. In addition, ADME properties of the DMAT molecule were examined and some drug-likeness, physicochemical, lipophilicity and pharmacokinetic properties of this molecule were determined. The ADME and Lipinski parameters of the DMAT molecule exhibited good drug-likeness properties.Communicated by Ramaswamy H. Sarma.
在这项研究中,通过 N,N-二甲基氨基苯甲醛和 L-酪氨酸的缩合反应,合成了一种新型席夫碱 2-[(4-二甲氨基-亚苄基)-氨基]-3-(4-羟基-苯基)-丙酸(DMAT)。通过 H-和 C-NMR、FTIR、UV-Vis 光谱和元素分析对得到的分子结构进行了表征。采用密度泛函理论(DFT)在 B3LYP 水平上使用 6-311 G(d,p)基组计算了优化的几何形状、振动波数和电子参数。此外,使用相同的 DFT/B3LYP/6-311G(d,p)三位一体计算了 DMAT 分子的 H-和 C-NMR、FTIR 和 UV-Vis 数据,并将这些计算得到的光谱与实验数据进行了比较。通过分子对接研究研究了 DMAT 分子与血管内皮生长因子受体-2(VEGFR-2)和β-酮酰基合酶(KAS III)蛋白的相互作用。然后将得到的结果与选定的药物活性物质雷戈非尼和异烟肼分子的分子对接结果进行了比较。最佳相互作用是 DMAT-VEGFR-2 之间的相互作用,结合能为-8.30 和-1586.97 kcal/mol,拟合度得分为满分。此外,还研究了 DMAT 分子的 ADME 性质,并确定了该分子的一些类药性、物理化学性质、亲脂性和药代动力学性质。DMAT 分子的 ADME 和 Lipinski 参数表现出良好的类药性。