Coral reef carnivorous fish biomass relates to oceanographic features depending on habitat and prey preference.

Carnivorous fish are a key part of the Indonesian human population sustenance, and it is important to design marine protected areas that include environmental features that allow these species to thrive. Many studies report the role of coral cover and habitat complexity in determining fish distribution on coral reefs but broader environmental factors such as current velocity and productivity are less studied. Southern Indonesia is characterised by upwellings and strong currents, stemming from the tidal cycle and the Indonesian Throughflow. In this study we investigate how current velocity, chlorophyll-a (chl-a), sea surface height and temperature relate to the biomass of carnivorous fish, considering the influence of habitat complexity and coral cover. Data were collected by surveying seven sites around Nusa Penida MPA for a total of 97 h of observation. Serranids and Lutjanids showed higher dependency on coral cover than fish from family Lethrinidae, Carangidae and Scombridae for which current, sea surface height, chl-a, and temperature were more influential predictors. Considering the similar trophic ecology of these species, the different relationship with oceanographic factors is likely related to different body shapes, living, and feeding habits between fish families. Changes in sea surface temperature and current velocity induced by vertical mixing are affecting coral reef fisheries-targeted species distribution in Nusa Penida and investigating these relationships on a broader scale will better inform marine spatial planning decisions.