Kim You Na, Kim Yoon Jeon, Seol Chang Ahn, Seo Eul-Ju, Lee Joo Yong, Yoon Young Hee
Department of Ophthalmology, Asan Medical Center, University of Ulsan College of Medicine, Seoul 05505, Republic of Korea.
GC Genome, Gyeonggi-do 16924, Republic of Korea.
J Ophthalmol. 2021 Oct 21;2021:5067271. doi: 10.1155/2021/5067271. eCollection 2021.
Retinitis pigmentosa (RP) shows great diversity between genotypes and phenotypes, and it is important to identify the causative genes. This study aimed to analyze the molecular profiles, associated ocular characteristics, and progression of RP in Korean patients.
All the genetic variants in patients with RP, identified using targeted next-generation sequencing (NGS) with a panel of 88 RP-related genes between November 2018 and November 2019, were retrospectively reviewed. All the patients underwent comprehensive ophthalmological evaluations, and their clinical and family histories were recorded. The best-corrected visual acuity (BCVA) deterioration and photoreceptor disruption progression rates were determined based on the major causative mutational genes using nonlinear mixed models, and the differences among them were investigated using the interaction effect.
Among the 144 probands, 82 variants in 24 causative genes were identified in 77 families (53.5%). Most of the RP cases were associated with autosomal recessive variants ( = 64 (44.4%)), followed by autosomal dominant ( = 10 (6.9%)) and X-linked variants ( = 3 (2.1%)). The four most frequently affected genes were EYS ( = 15 (10.4%)), USH2A ( = 12 (8.3%)), PDE6B ( = 9 (6.3%)), and RP1 ( = 8 (5.6%)). Epiretinal membranes and cystoid macular edema were frequently noted in the patients with USH2A (75.0%) and PDE6B (50.0%) variants, respectively. During the follow-up period, the BCVA and photoreceptor disruption changes were significantly different among the patients carrying the four common causative genes (=0.014 and 0.034, resp.). Patients with PDE6B variants showed faster BCVA changes (0.2 LogMAR/10 years), and those with USH2A variants showed the fastest ellipsoid zone disruptions (-170.4 m/year).
In conclusion, our genetic analysis using targeted NGS provides information about the prevalence of RP-associated mutations in Korean patients. Delineating clinical characteristics according to genetic variations may help clinicians identify subtype features and predict the clinical course of RP.
视网膜色素变性(RP)在基因型和表型之间表现出很大的差异,识别致病基因很重要。本研究旨在分析韩国RP患者的分子特征、相关眼部特征及病情进展。
回顾性分析2018年11月至2019年11月期间,通过对88个RP相关基因进行靶向二代测序(NGS)鉴定出的RP患者的所有基因变异。所有患者均接受了全面的眼科评估,并记录了他们的临床和家族病史。使用非线性混合模型,基于主要致病突变基因确定最佳矫正视力(BCVA)恶化和光感受器破坏进展率,并通过交互效应研究它们之间的差异。
在144名先证者中,77个家系(53.5%)中鉴定出24个致病基因的82个变异。大多数RP病例与常染色体隐性变异相关(=64例(44.4%)),其次是常染色体显性变异(=10例(6.9%))和X连锁变异(=3例(2.1%))。四个最常受累的基因是EYS(=15例(10.4%))、USH2A(=12例(8.3%))、PDE6B(=9例(6.3%))和RP1(=8例(5.6%))。视网膜前膜和黄斑囊样水肿分别在携带USH2A(75.0%)和PDE6B(50.0%)变异的患者中经常被发现。在随访期间,携带四个常见致病基因的患者之间,BCVA和光感受器破坏变化有显著差异(分别为=0.014和0.034)。携带PDE6B变异的患者BCVA变化更快(0.2 LogMAR/10年),携带USH2A变异的患者椭圆体带破坏最快(-170.4 m/年)。
总之,我们使用靶向NGS进行的基因分析提供了韩国患者中RP相关突变患病率的信息。根据基因变异描绘临床特征可能有助于临床医生识别亚型特征并预测RP的临床病程。