Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby V5A 1S6, British Columbia, Canada.
Department of Biological Sciences, Simon Fraser University, 8888 University Drive, Burnaby V5A 1S6, British Columbia, Canada.
ACS Chem Biol. 2021 Nov 19;16(11):2632-2640. doi: 10.1021/acschembio.1c00666. Epub 2021 Nov 1.
Sialidases catalyze the release of sialic acid from the terminus of glycan chains. We previously characterized the sialidase from the opportunistic fungal pathogen, and showed that it is a Kdnase. That is, this enzyme prefers 3-deoxy-d-glycero-d-galacto-non-2-ulosonates (Kdn glycosides) as the substrate compared to -acetylneuraminides (Neu5Ac). Here, we report characterization and crystal structures of putative sialidases from two other ascomycete fungal pathogens, (S) and (S). Unlike Kdnase (S), hydrolysis with the Neu5Ac substrates was negligible for S and S; thus, S and S are selective Kdnases. The second-order rate constant for hydrolysis of aryl Kdn glycosides by S is similar to that by S but 30-fold higher by S. The structures of these glycoside hydrolase family 33 (GH33) enzymes in complex with a range of ligands for both S and S show subtle changes in ring conformation that mimic the Michaelis complex, transition state, and covalent intermediate formed during catalysis. In addition, they can aid identification of important residues for distinguishing between Kdn and Neu5Ac substrates. When , and were grown in chemically defined media, Kdn was detected in mycelial extracts, but Neu5Ac was only observed in or extracts. The C8 monosaccharide 3-deoxy-d--oct-2-ulosonic acid (Kdo) was also identified in and samples. A fluorescent Kdn probe was synthesized and revealed the localization of S in vesicles at the cell surface.
唾液酸酶催化聚糖链末端唾液酸的释放。我们之前对机会性病原体的唾液酸酶进行了表征,并表明它是一种 Kdnase。也就是说,与 -乙酰神经氨酸(Neu5Ac)相比,该酶更偏爱 3-脱氧-d-甘油-d-半乳糖-壬-2-酮酸(Kdn 糖苷)作为底物。在这里,我们报道了另外两种子囊菌真菌病原体、(S)和(S)的推定唾液酸酶的特征和晶体结构。与 Kdnase(S)不同,S 和 S 对 Neu5Ac 底物的水解可以忽略不计;因此,S 和 S 是选择性的 Kdnase。S 水解芳基 Kdn 糖苷的二级反应常数与 S 相似,但 S 的反应常数高 30 倍。这些糖苷水解酶家族 33(GH33)酶与一系列 S 和 S 的配体形成复合物的结构显示出环构象的细微变化,模拟了迈克尔is 复合物、过渡态和催化过程中形成的共价中间物。此外,它们可以帮助识别区分 Kdn 和 Neu5Ac 底物的重要残基。当、和在化学定义的培养基中生长时,在菌丝体提取物中检测到 Kdn,但仅在或提取物中观察到 Neu5Ac。在和样品中也鉴定出 C8 单糖 3-脱氧-d--辛-2-酮酸(Kdo)。合成了一种荧光 Kdn 探针,揭示了 S 在细胞表面囊泡中的定位。