Elliott Mark D, James Leslie C, Simms Emily L, Sharma Priyana, Girard Louis P, Cheema Kim, Elliott Meghan J, Lauzon Julie L, Chun Justin
Department of Medicine, Cumming School of Medicine, University of Calgary, AB, Canada.
Department of Medical Genetics, Alberta Children's Hospital Research Institute, University of Calgary, AB, Canada.
Can J Kidney Health Dis. 2021 Oct 29;8:20543581211055001. doi: 10.1177/20543581211055001. eCollection 2021.
Genetic testing results are currently obtained approximately 1 year after referral to a medical genetics team for autosomal dominant polycystic kidney disease (ADPKD). We evaluated a mainstream genetic testing (MGT) pathway whereby the nephrology team provided pre-test counseling and selection of patients with suspected ADPKD for genetic testing prior to direct patient interaction by a medical geneticist.
A multidisciplinary team of nephrologists, genetic counselors, and medical geneticists developed an MGT pathway for ADPKD using current testing criteria for adult patient with suspected ADPKD and literature from MGT in oncology.
An MGT pathway was assessed using a prospective cohort and compared to a retrospective cohort of 56 patients with ADPKD who received genetic testing using the standard, traditional pathway prior to implementing the MGT for ADPKD. The mainstream pathway was evaluated using time to diagnosis, diagnostic yield, and a patient survey to assess patient perceptions of the MGT pathway.
We assessed 26 patients with ADPKD using the MGT and 18 underwent genetic testing with return of results. Of them, 52 patients had data available for analysis in the traditional control cohort. The time for return of results using our MGT pathway was significantly shorter with a median time to results of 6 months compared to 12 months for the traditional pathway. We identified causative variants in 61% of patients, variants of uncertain significance in 28%, and 10% had negative testing which is in line with expectations from the literature. The patient surveys showed high satisfaction rates with the MGT pathway.
This report is an evaluation of a new genetic testing pathway restricted to a single, publicly funded health care center. The MGT pathway involved a prospective collection of a limited number of patients with ADPKD with comparison to a retrospective cohort of patients with ADPKD evaluated by standard testing.
A MGT pathway using clearly defined criteria and commercially available gene panels for ADPKD can be successfully implemented in a publicly funded health care system to reduce the time required to obtain genetic results.
目前,在将患者转诊至医学遗传学团队进行常染色体显性多囊肾病(ADPKD)基因检测后,大约需要1年时间才能获得检测结果。我们评估了一种主流基因检测(MGT)途径,即肾病团队在医学遗传学家直接与患者接触之前,为疑似ADPKD患者提供检测前咨询并选择进行基因检测。
由肾病学家、遗传咨询师和医学遗传学家组成的多学科团队,利用针对疑似ADPKD成年患者的当前检测标准以及肿瘤学中MGT的文献,制定了ADPKD的MGT途径。
使用前瞻性队列评估MGT途径,并与56例ADPKD患者的回顾性队列进行比较,这56例患者在实施ADPKD的MGT之前,采用标准的传统途径接受了基因检测。通过诊断时间、诊断率以及患者调查来评估主流途径,以了解患者对MGT途径的看法。
我们使用MGT评估了26例ADPKD患者,其中18例接受了基因检测并得到了结果。在这些患者中,有52例患者的数据可用于传统对照队列的分析。与传统途径的12个月相比,使用我们的MGT途径获得结果的时间明显更短,中位结果返回时间为6个月。我们在61%的患者中鉴定出致病变异,28%为意义未明的变异,10%检测结果为阴性,这与文献预期相符。患者调查显示对MGT途径的满意度很高。
本报告是对一种新的基因检测途径的评估,该途径仅限于一个由公共资金资助的医疗中心。MGT途径涉及前瞻性收集有限数量的ADPKD患者,并与通过标准检测评估的ADPKD患者回顾性队列进行比较。
使用明确界定的标准和市售基因检测板的ADPKD的MGT途径可以在公共资助的医疗系统中成功实施,以减少获得基因检测结果所需的时间。