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早期莱-卡-佩病血浆外泌体的微小RNA序列分析

MicroRNA sequence analysis of plasma exosomes in early Legg-Calvé-Perthes disease.

作者信息

Huang Qian, Li Boxiang, Lin Chengsen, Chen Xianxiang, Wang Tiantian, Liu Jianhong, Liu Yun, Lu Rongbin, Liao Shijie, Ding Xiaofei

机构信息

Department of Trauma Orthopedic and Hand Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi, China.

Department of Trauma Orthopedic and Hand Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi, China; Guangxi Key Laboratory of Regenerative Medicine, Research Centre for Regenerative Medicine, Guangxi Medical University, Nanning, Guangxi, China.

出版信息

Cell Signal. 2022 Mar;91:110184. doi: 10.1016/j.cellsig.2021.110184. Epub 2021 Nov 2.

Abstract

The pathogenesis of Legg-Calvé-Perthes disease (LCPD) has not been fully elucidated, and studies on epigenetic changes that may contribute to the pathogenesis of LCPD are rare. MicroRNAs (miRNAs) are epigenetic modifications that play a critical role in gene regulation. This study aimed to determine the expression profiles of circulating exosomal miRNAs and examine the role of exosomal miRNAs in LCPD. Exosomes were extracted from the plasma of three patients with LCPD and three matched healthy volunteers. Total exosomal miRNAs were isolated, and next-generation sequencing and bioinformatic approaches were performed. The top 10 most differentially upregulated miRNAs were identified, and qRT-PCR validation was performed using additional 10 matches. In Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, plasma exosomes were used in verifying osteoclastogenesis and the endothelial dysfunction phenotypes involved. The elevated miRNAs in LCPD plasma exosomes were tested for osteoclastogenesis and endothelial dysfunction in vitro. Sequencing results revealed the expression profiles of plasma exosomal miRNAs with differential expression from the DESeq-identified miRNA profiles in LCPD versus controls in a pairwise comparison. Gene Ontology and KEGG pathway analyses indicated that the predicted target genes of different miRNAs were mainly enriched in the endothelial and osteoclast cells related to signaling pathways. Functional phenotype experiments showed that the plasma exosomes in the LCPD group promoted osteoclastogenesis and endothelial cell dysfunction. qRT-PCR experiments showed that nine miRNAs in circulating exosomes in LCPD patients were higher than those in the healthy controls. miR-3133, miR-4644, miR-4693-3p, and miR-4693-5p promoted endothelial dysfunction, and miR-3133, miR-4693-3p, miR-4693-5p, miR-141-3p and miR-30a promoted osteoclastogenesis in vitro. This study demonstrated that plasma exosomes from LCPD promote endothelial cell dysfunction and osteoclastogenesis likely through their miRNAs, which might contribute to the development of LCPD.

摘要

股骨头骨骺骨软骨病(Legg-Calvé-Perthes disease,LCPD)的发病机制尚未完全阐明,关于可能促成LCPD发病机制的表观遗传变化的研究也很少见。微小RNA(MicroRNAs,miRNAs)是表观遗传修饰,在基因调控中起关键作用。本研究旨在确定循环外泌体miRNAs的表达谱,并研究外泌体miRNAs在LCPD中的作用。从3例LCPD患者及3例匹配的健康志愿者的血浆中提取外泌体。分离总外泌体miRNAs,并进行下一代测序和生物信息学分析。确定了上调差异最大的前10个miRNAs,并使用另外10对样本进行qRT-PCR验证。在京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)通路分析中,使用血浆外泌体验证破骨细胞生成和所涉及的内皮功能障碍表型。对LCPD血浆外泌体中升高的miRNAs进行体外破骨细胞生成和内皮功能障碍检测。测序结果揭示了血浆外泌体miRNAs的表达谱,在成对比较中,其与LCPD组和对照组中DESeq鉴定的miRNA谱存在差异表达。基因本体论和KEGG通路分析表明,不同miRNAs的预测靶基因主要富集在与信号通路相关的内皮细胞和破骨细胞中。功能表型实验表明,LCPD组的血浆外泌体促进破骨细胞生成和内皮细胞功能障碍。qRT-PCR实验表明,LCPD患者循环外泌体中的9种miRNAs高于健康对照组。miR-3133、miR-4644、miR-4693-3p和miR-4693-5p促进内皮功能障碍,miR-3133、miR-4693-3p、miR-4693-5p、miR-141-3p和miR-30a在体外促进破骨细胞生成。本研究表明,LCPD患者的血浆外泌体可能通过其miRNAs促进内皮细胞功能障碍和破骨细胞生成,这可能有助于LCPD的发展。

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