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多元时间序列中直接因果关系度量和滞后估计的评估

Evaluation of Directed Causality Measures and Lag Estimations in Multivariate Time-Series.

作者信息

Heyse Jolan, Sheybani Laurent, Vulliémoz Serge, van Mierlo Pieter

机构信息

Medical Image and Signal Processing (MEDISIP), Department of Electronics and Information Systems (ELIS), Ghent University, Ghent, Belgium.

EEG and Epilepsy Unit, University Hospitals and Faculty of Medicine, University of Geneva, Geneva, Switzerland.

出版信息

Front Syst Neurosci. 2021 Oct 22;15:620338. doi: 10.3389/fnsys.2021.620338. eCollection 2021.

Abstract

The detection of causal effects among simultaneous observations provides knowledge about the underlying network, and is a topic of interests in many scientific areas. Over the years different causality measures have been developed, each with their own advantages and disadvantages. However, an extensive evaluation study is missing. In this work we consider some of the best-known causality measures i.e., cross-correlation, (conditional) Granger causality index (CGCI), partial directed coherence (PDC), directed transfer function (DTF), and partial mutual information on mixed embedding (PMIME). To correct for noise-related spurious connections, each measure (except PMIME) is tested for statistical significance based on surrogate data. The performance of the causality metrics is evaluated on a set of simulation models with distinct characteristics, to assess how well they work in- as well as outside of their "comfort zone." PDC and DTF perform best on systems with frequency-specific connections, while PMIME is the only one able to detect non-linear interactions. The varying performance depending on the system characteristics warrants the use of multiple measures and comparing their results to avoid errors. Furthermore, lags between coupled variables are inherent to real-world systems and could hold essential information on the network dynamics. They are however often not taken into account and we lack proper tools to estimate them. We propose three new methods for lag estimation in multivariate time series, based on autoregressive modelling and information theory. One of the autoregressive methods and the one based on information theory were able to reliably identify the correct lag value in different simulated systems. However, only the latter was able to maintain its performance in the case of non-linear interactions. As a clinical application, the same methods are also applied on an intracranial recording of an epileptic seizure. The combined knowledge from the causality measures and insights from the simulations, on how these measures perform under different circumstances and when to use which one, allow us to recreate a plausible network of the seizure propagation that supports previous observations of desynchronisation and synchronisation during seizure progression. The lag estimation results show absence of a relationship between connectivity strength and estimated lag values, which contradicts the line of thinking in connectivity shaped by the neuron doctrine.

摘要

在同步观测中检测因果效应能提供关于潜在网络的知识,并且是许多科学领域感兴趣的话题。多年来已开发出不同的因果关系度量方法,每种方法都有其自身的优缺点。然而,缺少一项广泛的评估研究。在这项工作中,我们考虑了一些最著名的因果关系度量方法,即互相关、(条件)格兰杰因果指数(CGCI)、偏定向相干(PDC)、定向传递函数(DTF)以及混合嵌入上的部分互信息(PMIME)。为了校正与噪声相关的虚假连接,基于替代数据对每个度量方法(除了PMIME)进行统计显著性检验。在一组具有不同特征的模拟模型上评估因果关系度量的性能,以评估它们在其“舒适区”内外的工作效果。PDC和DTF在具有特定频率连接的系统上表现最佳,而PMIME是唯一能够检测非线性相互作用的方法。根据系统特征的不同性能表现保证了使用多种度量方法并比较它们的结果以避免错误。此外,耦合变量之间的滞后是现实世界系统所固有的,并且可能包含关于网络动态的重要信息。然而,它们常常未被考虑在内,而且我们缺乏合适的工具来估计它们。我们基于自回归建模和信息论提出了三种用于多元时间序列滞后估计的新方法。其中一种自回归方法和基于信息论的方法能够在不同的模拟系统中可靠地识别正确的滞后值。然而,只有后者在非线性相互作用的情况下能够保持其性能。作为临床应用,同样的方法也应用于癫痫发作的颅内记录。来自因果关系度量的综合知识以及模拟中的见解,关于这些度量方法在不同情况下的表现以及何时使用哪种方法,使我们能够重建一个合理的癫痫发作传播网络,该网络支持先前关于癫痫发作进展期间去同步化和同步化的观察结果。滞后估计结果表明连接强度与估计的滞后值之间不存在关系,这与神经元学说所塑造的连接性思维方式相矛盾。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddec/8569855/6765b83c5cb2/fnsys-15-620338-g0001.jpg

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