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主导骨骼发育的主调控因子的全基因组规模作用。

Genome-scale actions of master regulators directing skeletal development.

作者信息

Ohba Shinsuke

机构信息

Department of Cell Biology, Institute of Biomedical Sciences, Nagasaki University, 1-7-1 Sakamoto, Nagasaki 852-8588, Japan.

出版信息

Jpn Dent Sci Rev. 2021 Nov;57:217-223. doi: 10.1016/j.jdsr.2021.10.001. Epub 2021 Oct 25.

DOI:10.1016/j.jdsr.2021.10.001
PMID:34745394
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8556520/
Abstract

The mammalian skeleton develops through two distinct modes of ossification: intramembranous ossification and endochondral ossification. During the process of skeletal development, SRY-box containing gene 9 (Sox9), runt-related transcription factor 2 (Runx2), and Sp7 work as master transcription factors (TFs) or transcriptional regulators, underlying cell fate specification of the two distinct populations: bone-forming osteoblasts and cartilage-forming chondrocytes. In the past two decades, core transcriptional circuits underlying skeletal development have been identified mainly through mouse genetics and biochemical approaches. Recently emerging next-generation sequencer (NGS)-based studies have provided genome-scale views on the gene regulatory landscape programmed by the master TFs/transcriptional regulators. With particular focus on Sox9, Runx2, and Sp7, this review aims to discuss the gene regulatory landscape in skeletal development, which has been identified by genome-scale data, and provide future perspectives in this field.

摘要

哺乳动物的骨骼通过两种不同的骨化方式发育

膜内骨化和软骨内骨化。在骨骼发育过程中,含SRY盒基因9(Sox9)、 runt相关转录因子2(Runx2)和Sp7作为主要转录因子(TFs)或转录调节因子,决定了两种不同细胞群体的命运:形成骨的成骨细胞和形成软骨的软骨细胞。在过去二十年中,骨骼发育的核心转录回路主要通过小鼠遗传学和生化方法得以确定。最近基于新一代测序仪(NGS)的研究提供了由主要TFs/转录调节因子编程的基因调控全景图。本文特别聚焦于Sox9、Runx2和Sp7,旨在讨论通过基因组规模数据确定的骨骼发育中的基因调控全景图,并提供该领域的未来展望。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8809/8556520/d80f9c87aeaf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8809/8556520/e9fd3b0643a9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8809/8556520/d80f9c87aeaf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8809/8556520/e9fd3b0643a9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8809/8556520/d80f9c87aeaf/gr2.jpg

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Proc Natl Acad Sci U S A. 2021 Feb 23;118(8). doi: 10.1073/pnas.2019152118.
2
Foxc1 establishes enhancer accessibility for craniofacial cartilage differentiation.Foxc1 为颅面软骨分化建立增强子可及性。
Elife. 2021 Jan 27;10:e63595. doi: 10.7554/eLife.63595.
3
Dissecting human embryonic skeletal stem cell ontogeny by single-cell transcriptomic and functional analyses.
通过单细胞转录组学和功能分析解析人类胚胎骨骼干细胞的个体发生。
Cell Res. 2021 Jul;31(7):742-757. doi: 10.1038/s41422-021-00467-z. Epub 2021 Jan 20.
4
Single cell transcriptomic analysis of human pluripotent stem cell chondrogenesis.人类多能干细胞软骨生成的单细胞转录组分析。
Nat Commun. 2021 Jan 13;12(1):362. doi: 10.1038/s41467-020-20598-y.
5
A single-cell transcriptomic atlas of the developing chicken limb.发育中鸡肢的单细胞转录组图谱。
BMC Genomics. 2019 May 22;20(1):401. doi: 10.1186/s12864-019-5802-2.
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Combinatorial CRISPR/Cas9 Approach to Elucidate a Far-Upstream Enhancer Complex for Tissue-Specific Sox9 Expression.组合型 CRISPR/Cas9 方法阐明组织特异性 Sox9 表达的远上游增强子复合物。
Dev Cell. 2018 Sep 24;46(6):794-806.e6. doi: 10.1016/j.devcel.2018.07.024. Epub 2018 Aug 23.
7
GATA4 Directly Regulates Expression and Osteoblast Differentiation.GATA4直接调控表达和成骨细胞分化。
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