• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

机器学习驯服发散的密度泛函近似:达成一致的材料设计原则的新途径。

Machine learning to tame divergent density functional approximations: a new path to consensus materials design principles.

作者信息

Duan Chenru, Chen Shuxin, Taylor Michael G, Liu Fang, Kulik Heather J

机构信息

Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA

Department of Chemistry, Massachusetts Institute of Technology Cambridge MA 02139 USA.

出版信息

Chem Sci. 2021 Sep 2;12(39):13021-13036. doi: 10.1039/d1sc03701c. eCollection 2021 Oct 13.

DOI:10.1039/d1sc03701c
PMID:34745533
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8513898/
Abstract

Virtual high-throughput screening (VHTS) with density functional theory (DFT) and machine-learning (ML)-acceleration is essential in rapid materials discovery. By necessity, efficient DFT-based workflows are carried out with a single density functional approximation (DFA). Nevertheless, properties evaluated with different DFAs can be expected to disagree for cases with challenging electronic structure (, open-shell transition-metal complexes, TMCs) for which rapid screening is most needed and accurate benchmarks are often unavailable. To quantify the effect of DFA bias, we introduce an approach to rapidly obtain property predictions from 23 representative DFAs spanning multiple families, "rungs" (, semi-local to double hybrid) and basis sets on over 2000 TMCs. Although computed property values (, spin state splitting and frontier orbital gap) differ by DFA, high linear correlations persist across all DFAs. We train independent ML models for each DFA and observe convergent trends in feature importance, providing DFA-invariant, universal design rules. We devise a strategy to train artificial neural network (ANN) models informed by all 23 DFAs and use them to predict properties (, spin-splitting energy) of over 187k TMCs. By requiring consensus of the ANN-predicted DFA properties, we improve correspondence of computational lead compounds with literature-mined, experimental compounds over the typically employed single-DFA approach.

摘要

采用密度泛函理论(DFT)和机器学习(ML)加速的虚拟高通量筛选(VHTS)对于快速发现材料至关重要。出于必要,基于DFT的高效工作流程是在单一密度泛函近似(DFA)下进行的。然而,对于具有挑战性的电子结构(如开壳过渡金属配合物,TMCs)的情况,预计使用不同DFA评估的性质会存在差异,而这些情况恰恰是最需要快速筛选且通常缺乏准确基准的。为了量化DFA偏差的影响,我们引入了一种方法,可从跨越多个族、“梯级”(从半局域到双杂化)的23种代表性DFA以及超过2000种TMCs的基组中快速获得性质预测。尽管计算得到的性质值(如自旋态分裂和前沿轨道间隙)因DFA而异,但所有DFA之间仍存在高度线性相关性。我们为每个DFA训练独立的ML模型,并观察特征重要性的收敛趋势,从而提供与DFA无关的通用设计规则。我们设计了一种策略,训练受所有23种DFA启发的人工神经网络(ANN)模型,并使用它们来预测超过18.7万个TMCs的性质(如自旋分裂能)。通过要求ANN预测的DFA性质达成共识,我们比通常采用的单DFA方法提高了计算先导化合物与文献挖掘的实验化合物之间的对应性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a1574d4f3ad8/d1sc03701c-f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/312659e7c881/d1sc03701c-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/d772d4ae05e5/d1sc03701c-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/609abd494812/d1sc03701c-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/52c919fddd1b/d1sc03701c-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a0a7682f5c7c/d1sc03701c-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/6146197d7bea/d1sc03701c-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/f600ace2fab7/d1sc03701c-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a391fb7f424e/d1sc03701c-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a1574d4f3ad8/d1sc03701c-f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/312659e7c881/d1sc03701c-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/d772d4ae05e5/d1sc03701c-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/609abd494812/d1sc03701c-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/52c919fddd1b/d1sc03701c-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a0a7682f5c7c/d1sc03701c-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/6146197d7bea/d1sc03701c-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/f600ace2fab7/d1sc03701c-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a391fb7f424e/d1sc03701c-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7c4/8513898/a1574d4f3ad8/d1sc03701c-f9.jpg

相似文献

1
Machine learning to tame divergent density functional approximations: a new path to consensus materials design principles.机器学习驯服发散的密度泛函近似:达成一致的材料设计原则的新途径。
Chem Sci. 2021 Sep 2;12(39):13021-13036. doi: 10.1039/d1sc03701c. eCollection 2021 Oct 13.
2
Insights into the deviation from piecewise linearity in transition metal complexes from supervised machine learning models.从监督机器学习模型看过渡金属配合物的分段线性偏离。
Phys Chem Chem Phys. 2023 Mar 15;25(11):8103-8116. doi: 10.1039/d3cp00258f.
3
Assessing Density Functional Theory for Chemically Relevant Open-Shell Transition Metal Reactions.评估密度泛函理论用于化学相关的开壳层过渡金属反应
J Chem Theory Comput. 2021 Oct 12;17(10):6134-6151. doi: 10.1021/acs.jctc.1c00659. Epub 2021 Sep 21.
4
A transferable recommender approach for selecting the best density functional approximations in chemical discovery.一种用于化学发现中选择最佳密度泛函近似的可转移推荐方法。
Nat Comput Sci. 2023 Jan;3(1):38-47. doi: 10.1038/s43588-022-00384-0. Epub 2022 Dec 22.
5
Navigating Transition-Metal Chemical Space: Artificial Intelligence for First-Principles Design.探索过渡金属化学空间:基于第一性原理设计的人工智能
Acc Chem Res. 2021 Feb 2;54(3):532-545. doi: 10.1021/acs.accounts.0c00686. Epub 2021 Jan 22.
6
Pure non-local machine-learned density functional theory for electron correlation.用于电子关联的纯非局部机器学习密度泛函理论
Nat Commun. 2021 Jan 12;12(1):344. doi: 10.1038/s41467-020-20471-y.
7
Predicting electronic structure properties of transition metal complexes with neural networks.用神经网络预测过渡金属配合物的电子结构性质。
Chem Sci. 2017 Jul 1;8(7):5137-5152. doi: 10.1039/c7sc01247k. Epub 2017 May 17.
8
Machine Learning Prediction of the Experimental Transition Temperature of Fe(II) Spin-Crossover Complexes.铁(II)自旋交叉配合物实验转变温度的机器学习预测
J Phys Chem A. 2024 Jan 11;128(1):204-216. doi: 10.1021/acs.jpca.3c07104. Epub 2023 Dec 26.
9
Unveiling the Role of Spin Currents on the Giant Rashba Splitting in Single-Layer WSe.揭示自旋流在单层二硒化钨巨 Rashba 分裂中的作用
J Phys Chem Lett. 2024 Jul 25;15(29):7442-7448. doi: 10.1021/acs.jpclett.4c01607. Epub 2024 Jul 15.
10
Introductory lecture: when the density of the noninteracting reference system is not the density of the physical system in density functional theory.导论讲座:在密度泛函理论中,当非相互作用参考系统的密度不是物理系统的密度时。
Faraday Discuss. 2020 Dec 4;224(0):9-26. doi: 10.1039/d0fd00102c.

引用本文的文献

1
Adapting hybrid density functionals with machine learning.通过机器学习调整杂化密度泛函
Sci Adv. 2025 Jan 31;11(5):eadt7769. doi: 10.1126/sciadv.adt7769.
2
Identifying and embedding transferability in data-driven representations of chemical space.在化学空间的数据驱动表示中识别并嵌入可转移性。
Chem Sci. 2024 Jun 21;15(28):11122-11133. doi: 10.1039/d4sc02358g. eCollection 2024 Jul 17.
3
Uncertain of uncertainties? A comparison of uncertainty quantification metrics for chemical data sets.对不确定性不确定?化学数据集不确定性量化指标的比较。

本文引用的文献

1
Replacing hybrid density functional theory: motivation and recent advances.取代杂化密度泛函理论:动机与最新进展。
Chem Soc Rev. 2021 Aug 7;50(15):8470-8495. doi: 10.1039/d0cs01074j. Epub 2021 Jun 1.
2
Putting Density Functional Theory to the Test in Machine-Learning-Accelerated Materials Discovery.在机器学习加速的材料发现中对密度泛函理论进行测试
J Phys Chem Lett. 2021 May 20;12(19):4628-4637. doi: 10.1021/acs.jpclett.1c00631. Epub 2021 May 11.
3
Navigating Transition-Metal Chemical Space: Artificial Intelligence for First-Principles Design.
J Cheminform. 2023 Dec 18;15(1):121. doi: 10.1186/s13321-023-00790-0.
4
Active Learning Exploration of Transition-Metal Complexes to Discover Method-Insensitive and Synthetically Accessible Chromophores.过渡金属配合物的主动学习探索以发现对方法不敏感且可合成获得的发色团。
JACS Au. 2022 Dec 1;3(2):391-401. doi: 10.1021/jacsau.2c00547. eCollection 2023 Feb 27.
5
QM/MM study of N501 involved intermolecular interaction between SARS-CoV-2 receptor binding domain and antibody of human origin.QM/MM 研究表明,SARS-CoV-2 受体结合域与人源抗体之间存在 N501 位的分子间相互作用。
Comput Biol Chem. 2023 Feb;102:107810. doi: 10.1016/j.compbiolchem.2023.107810. Epub 2023 Jan 4.
6
Detection of multi-reference character imbalances enables a transfer learning approach for virtual high throughput screening with coupled cluster accuracy at DFT cost.多参考特征不平衡的检测实现了一种迁移学习方法,可在密度泛函理论(DFT)成本下以耦合簇精度进行虚拟高通量筛选。
Chem Sci. 2022 Apr 5;13(17):4962-4971. doi: 10.1039/d2sc00393g. eCollection 2022 May 4.
7
Unlocking the computational design of metal-organic cages.解锁金属有机笼的计算设计。
Chem Commun (Camb). 2022 Mar 18;58(23):3717-3730. doi: 10.1039/d2cc00532h.
8
Chalcogen Bonding in the Molecular Dimers of WCh (Ch = S, Se, Te): On the Basic Understanding of the Local Interfacial and Interlayer Bonding Environment in 2D Layered Tungsten Dichalcogenides.二硫化钨分子二聚体中的硫属键合(Ch = S、Se、Te):对二维层状二硫化钨中局部界面和层间键合环境的基本理解。
Int J Mol Sci. 2022 Jan 23;23(3):1263. doi: 10.3390/ijms23031263.
探索过渡金属化学空间:基于第一性原理设计的人工智能
Acc Chem Res. 2021 Feb 2;54(3):532-545. doi: 10.1021/acs.accounts.0c00686. Epub 2021 Jan 22.
4
Theoretical study on conformational energies of transition metal complexes.过渡金属配合物构象能的理论研究。
Phys Chem Chem Phys. 2021 Jan 6;23(1):287-299. doi: 10.1039/d0cp04696e.
5
DeePKS: A Comprehensive Data-Driven Approach toward Chemically Accurate Density Functional Theory.DeePKS:一种全面的数据驱动方法,实现化学精确密度泛函理论。
J Chem Theory Comput. 2021 Jan 12;17(1):170-181. doi: 10.1021/acs.jctc.0c00872. Epub 2020 Dec 9.
6
Rapid Detection of Strong Correlation with Machine Learning for Transition-Metal Complex High-Throughput Screening.利用机器学习快速检测与过渡金属配合物高通量筛选的强相关性
J Phys Chem Lett. 2020 Oct 1;11(19):8067-8076. doi: 10.1021/acs.jpclett.0c02288. Epub 2020 Sep 14.
7
Accurate Hybrid Density Functionals with UW12 Correlation.带有 UW12 相关的精确杂化密度泛函。
J Chem Theory Comput. 2020 Oct 13;16(10):6176-6194. doi: 10.1021/acs.jctc.0c00442. Epub 2020 Sep 9.
8
Understanding the diversity of the metal-organic framework ecosystem.理解金属-有机骨架生态系统的多样性。
Nat Commun. 2020 Aug 13;11(1):4068. doi: 10.1038/s41467-020-17755-8.
9
Semi-supervised Machine Learning Enables the Robust Detection of Multireference Character at Low Cost.半监督机器学习能够以低成本对多参考特征进行稳健检测。
J Phys Chem Lett. 2020 Aug 20;11(16):6640-6648. doi: 10.1021/acs.jpclett.0c02018. Epub 2020 Aug 5.
10
Density Functionals for Hydrogen Storage: Defining the H2Bind275 Test Set with Ab Initio Benchmarks and Assessment of 55 Functionals.用于储氢的密度泛函:用从头算基准和对 55 种泛函的评估来定义 H2Bind275 测试集。
J Chem Theory Comput. 2020 Aug 11;16(8):4963-4982. doi: 10.1021/acs.jctc.0c00292. Epub 2020 Jul 16.