Pack Chan-Gi
Convergence Medicine Research Center (CREDIT), Asan Institute for Life Sciences, Asan Medical Center, Seoul 05505, Republic of Korea.
Department of Convergence Medicine, University of Ulsan College of Medicine, Seoul 05505, Republic of Korea.
Biophys Physicobiol. 2021 Oct 15;18:244-253. doi: 10.2142/biophysico.bppb-v18.027. eCollection 2021.
The cell is three-dimensionally and dynamically organized into cellular compartments, including the endoplasmic reticulum, mitochondria, vesicles, and nucleus, which have high relative molecular density. The structure and functions of these compartments and organelles may be deduced from the diffusion and interaction of related biomolecules. Among these cellular components, various protein molecules can freely access the nucleolus or mitotic chromosome through Brownian diffusion, even though they have a densely packed structure. However, physicochemical properties of the nucleolus and chromosomes, such as molecular density and volume, are not yet fully understood under changing cellular conditions. Many studies have been conducted based on high-resolution imaging and analysis techniques using fluorescence. However, there are limitations in imaging only fluorescently labeled molecules, and cytotoxicity occurs during three-dimensional imaging. Alternatively, the recently developed label-free three-dimensional optical diffraction tomography (ODT) imaging technique can divide various organelles in cells into volumes and analyze them by refractive index, although specific molecules cannot be observed. A previous study established an analytical method that provides comprehensive insights into the physical properties of the nucleolus and mitotic chromosome by utilizing the advantages of ODT and fluorescence techniques, such as fluorescence correlation spectroscopy and confocal laser scanning microscopy. This review article summarizes a recent study and discusses the future aspects of the ODT for cellular compartments.
细胞在三维空间中动态组织成细胞区室,包括内质网、线粒体、囊泡和细胞核,这些区室具有较高的相对分子密度。这些区室和细胞器的结构与功能可从相关生物分子的扩散和相互作用中推导出来。在这些细胞成分中,各种蛋白质分子即使具有紧密堆积的结构,也能通过布朗扩散自由进入核仁或有丝分裂染色体。然而,在不断变化的细胞条件下,核仁与染色体的物理化学性质,如分子密度和体积,尚未得到充分了解。许多研究是基于使用荧光的高分辨率成像和分析技术进行的。然而,仅对荧光标记分子成像存在局限性,并且在三维成像过程中会产生细胞毒性。另外,最近开发的无标记三维光学衍射断层扫描(ODT)成像技术可以将细胞中的各种细胞器划分为不同体积,并通过折射率对其进行分析,尽管无法观察到特定分子。先前的一项研究建立了一种分析方法,该方法利用ODT和荧光技术(如荧光相关光谱和共聚焦激光扫描显微镜)的优势,全面深入了解核仁与有丝分裂染色体的物理性质。这篇综述文章总结了最近的一项研究,并讨论了ODT在细胞区室方面的未来发展方向。