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基于基因组起源的非小细胞肺癌肿瘤突变负担、免疫治疗应用和结局的差异。

Disparities in Tumor Mutational Burden, Immunotherapy Use, and Outcomes Based on Genomic Ancestry in Non-Small-Cell Lung Cancer.

机构信息

Johns Hopkins University, Baltimore, MD.

Genentech Inc, South San Francisco, CA.

出版信息

JCO Glob Oncol. 2021 Sep;7:1537-1546. doi: 10.1200/GO.21.00309.

Abstract

PURPOSE

In patients with advanced non-small-cell lung cancer (aNSCLC), tumor mutational burden (TMB) may vary by genomic ancestry; however, its impact on treatment outcomes is unclear. This retrospective, observational study describes treatment patterns of patients with aNSCLC by genomic ancestry and electronic health record (EHR)-reported race and/or ethnicity and evaluates differences in TMB, cancer immunotherapy (CIT) access, and treatment outcomes across racial and ancestral groups.

METHODS

Patients diagnosed with aNSCLC after January 1, 2011, were selected from a real-world deidentified clinicogenomics database and EHR-derived database; continuously enrolled patients were evaluated. Race and/or ethnicity was recorded using variables from the EHR database; genomic ancestry was classified by single-nucleotide polymorphisms on a next-generation sequencing panel. A threshold of 16 mutations per megabase was used to categorize TMB status.

RESULTS

Of 59,559 patients in the EHR-derived database and 7,548 patients in the clinicogenomics database, 35,016 (58.8%) and 4,392 (58.2%) were continuously enrolled, respectively. CIT use was similar across EHR-reported race groups, ranging from 34.4% to 37.3% for non-Hispanic Asian and non-Hispanic Black patients, respectively. TMB levels varied significantly across ancestry groups ( < .001); patients of African ancestry had the highest median TMB (8.75 mutations per megabase; interquartile range, 4.35-14.79). In patients who had received CIT, high TMB was associated with improved overall survival compared with low TMB (20.89 11.83 months; hazard ratio, 0.60; 95% CI, 0.51 to 0.70) across genomic ancestral groups.

CONCLUSION

These results suggest that equitable access to next-generation sequencing may improve aNSCLC outcome disparities in racially and ancestrally diverse populations.

摘要

目的

在晚期非小细胞肺癌(aNSCLC)患者中,肿瘤突变负担(TMB)可能因基因组起源而异;然而,其对治疗结果的影响尚不清楚。这项回顾性观察研究描述了根据基因组起源以及电子健康记录(EHR)报告的种族和/或族裔划分的 aNSCLC 患者的治疗模式,并评估了不同种族和祖裔群体之间 TMB、癌症免疫治疗(CIT)的可及性以及治疗结果的差异。

方法

从真实世界的无标识临床基因组学数据库和 EHR 衍生数据库中选择 2011 年 1 月 1 日以后诊断为 aNSCLC 的患者;连续入组的患者进行了评估。种族和/或族裔使用 EHR 数据库中的变量进行记录;基因组起源通过下一代测序面板上的单核苷酸多态性进行分类。使用 16 个突变/兆碱基的阈值来分类 TMB 状态。

结果

在 EHR 衍生数据库中的 59559 例患者和临床基因组学数据库中的 7548 例患者中,分别有 35016(58.8%)和 4392(58.2%)例患者连续入组。EHR 报告的种族组之间 CIT 的使用情况相似,非西班牙裔亚裔患者的CIT 使用比例分别为 34.4%和 37.3%,而非西班牙裔黑人患者的CIT 使用比例分别为 34.4%和 37.3%。不同祖裔群体之间的 TMB 水平差异显著(<0.001);非洲裔患者的中位 TMB 最高(8.75 个突变/兆碱基;四分位间距,4.35-14.79)。在接受 CIT 的患者中,与低 TMB 相比,高 TMB 与整体生存率的提高相关(20.89 11.83 个月;危险比,0.60;95%CI,0.51 至 0.70),跨越基因组祖裔群体。

结论

这些结果表明,公平获得下一代测序可能会改善在种族和祖裔多样化人群中 NSCLC 治疗结果的差异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31e0/8577674/20732b0687dc/go-7-go.21.00309-g001.jpg

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