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Extension of platelet shelf life with an improved bacterial testing algorithm.
Transfusion. 2020 Dec;60(12):2918-2928. doi: 10.1111/trf.16112. Epub 2020 Nov 2.
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Fast and accurate long-read assembly with wtdbg2.
Nat Methods. 2020 Feb;17(2):155-158. doi: 10.1038/s41592-019-0669-3. Epub 2019 Dec 9.
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Morphological and Biological Characteristics of Biofilm Formed in the Presence of Plasma.
Microb Drug Resist. 2019 Jun;25(5):668-676. doi: 10.1089/mdr.2019.0068. Epub 2019 May 17.
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Regulation of Virulence.
Microbiol Spectr. 2019 Apr 5;7(2). doi: 10.1128/microbiolspec.GPP3-0031-2018.
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Assembly of long, error-prone reads using repeat graphs.
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
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fastp: an ultra-fast all-in-one FASTQ preprocessor.
Bioinformatics. 2018 Sep 1;34(17):i884-i890. doi: 10.1093/bioinformatics/bty560.
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Open-access bacterial population genomics: BIGSdb software, the PubMLST.org website and their applications.
Wellcome Open Res. 2018 Sep 24;3:124. doi: 10.12688/wellcomeopenres.14826.1. eCollection 2018.
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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.

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