Program for Neurotrauma, Neuroproteomics & Biomarkers Research, Departmentof Emergency Medicine, University of Florida, Gainesville, FL, 32611, USA.
Department of Chemistry, University of Florida, Gainesville, FL, 32611, USA.
Mol Neurobiol. 2022 Feb;59(2):731-747. doi: 10.1007/s12035-021-02600-w. Epub 2021 Nov 11.
Traumatic brain injury (TBI) is a major neurological disorder without FDA-approved therapies. In this study, we have examined the concept that TBI might trigger global brain proteolysis in the acute post-injury phase. Thus, we conducted a systemic proteolytic peptidomics analysis using acute cerebrospinal fluid (CSF) samples from TBI patients and normal control samples. We employed ultrafiltration-based low molecular weight (LMW; < 10 kDa) peptide enrichment, coupled with nano-reversed-phase liquid chromatography/tandem mass spectrometry analysis, followed with orthogonal quantitative immunoblotting-based protein degradation analysis. We indeed identified novel patterns of injury-dependent proteolytic peptides derived from neuronal components (pre- and post-synaptic terminal, dendrites, axons), extracellular matrix, oligodendrocytes, microglial cells, and astrocytes. Among these, post-synaptic protein neurogranin was identified for the first time converted to neurogranin peptides including neurogranin peptide (aa 16-64) that is phosphorylated at Ser-36/48 (P-NG-fragment) in acute human TBI CSF samples vs. normal control with a receiver operating characteristic area under the curve of 0.957. We also identified detailed processing of astroglia protein (vimentin) and oligodendrocyte protein (MBP and Golli-MBP) to protein breakdown products (BDPs) and/or LMW proteolytic peptides after TBI. In addition, using MS/MS selected reaction monitoring method, two C-terminally released MBP peptides TQDENPVVHFF and TQDENPVVHF were found to be elevated in acute and subacute TBI CSF samples as compared to their normal control counterparts. These findings imply that future therapeutic strategies might be placed on the suppression of brain proteolysis as a target. The endogenous proteolytic peptides discovered in human TBI biofluid could represent useful diagnostic and monitoring tools for TBI.
创伤性脑损伤(TBI)是一种没有 FDA 批准疗法的主要神经疾病。在这项研究中,我们研究了 TBI 可能在受伤后急性期引发全脑蛋白水解的概念。因此,我们使用 TBI 患者和正常对照样本的急性脑脊液(CSF)样本进行了系统的蛋白水解肽组学分析。我们采用超滤法进行低分子量(LMW;<10 kDa)肽富集,结合纳升反相液相色谱/串联质谱分析,再进行正交定量免疫印迹法进行蛋白质降解分析。我们确实鉴定了源自神经元成分(突触前和突触后末端、树突、轴突)、细胞外基质、少突胶质细胞、小胶质细胞和星形胶质细胞的损伤依赖性蛋白水解肽的新图谱。在这些肽中,首次鉴定到突触后蛋白神经颗粒蛋白转化为神经颗粒蛋白肽,包括在急性人类 TBI CSF 样本中磷酸化 Ser-36/48 的神经颗粒蛋白肽(aa 16-64)(P-NG-片段),与正常对照相比,其接受者操作特征曲线下面积为 0.957。我们还鉴定了星形胶质蛋白(波形蛋白)和少突胶质细胞蛋白(MBP 和 Golli-MBP)在 TBI 后详细的蛋白水解产物(BDP)和/或 LMW 蛋白水解肽的加工过程。此外,使用 MS/MS 选择反应监测方法,发现两种 C 端释放的 MBP 肽 TQDENPVVHFF 和 TQDENPVVHF 在急性和亚急性 TBI CSF 样本中升高,与正常对照相比。这些发现表明,未来的治疗策略可能将抑制脑蛋白水解作为目标。在人类 TBI 生物流体中发现的内源性蛋白水解肽可能代表 TBI 的有用诊断和监测工具。