• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

沿曲线轨迹的电荷流轮廓:分析分子间相互作用时电荷位移的灵活方案。

Charge-Flow Profiles along Curvilinear Paths: A Flexible Scheme for the Analysis of Charge Displacement upon Intermolecular Interactions.

机构信息

Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy.

Istituto Nazionale di Fisica Nucleare (INFN)-Sezione di Pisa, Largo Bruno Pontecorvo 3, 56127 Pisa, Italy.

出版信息

Molecules. 2021 Oct 23;26(21):6409. doi: 10.3390/molecules26216409.

DOI:10.3390/molecules26216409
PMID:34770822
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8586930/
Abstract

The Charge-Displacement (CD) analysis has proven to be a powerful tool for a quantitative characterization of the electron-density flow occurring upon chemical bonding along a suitably chosen interaction axis. In several classes of interesting intermolecular interactions, however, an interaction axis cannot be straightforwardly defined, and the CD analysis loses consistency and usefulness. In this article, we propose a general, flexible reformulation of the CD analysis capable of providing a quantitative view of the charge displacement along custom curvilinear paths. The new scheme naturally reduces to ordinary CD analysis if the path is chosen to be a straight line. An implementation based on a discrete sampling of the electron densities and a Voronoi space partitioning is described and shown in action on two test cases of a metal-carbonyl and a pyridine-ammonia complex.

摘要

荷移(CD)分析已被证明是一种强大的工具,可用于定量描述沿适当选择的相互作用轴发生的化学键合过程中的电子密度流。然而,在几类有趣的分子间相互作用中,无法直接定义相互作用轴,此时 CD 分析失去了一致性和实用性。在本文中,我们提出了一种 CD 分析的通用、灵活的重构方案,该方案能够沿自定义曲线路径提供电荷位移的定量视图。如果选择的路径为直线,则新方案自然会简化为普通的 CD 分析。本文描述了一种基于电子密度离散采样和 Voronoi 空间划分的实现,并在金属羰基和吡啶-氨络合物的两个测试案例中展示了其实际应用。

相似文献

1
Charge-Flow Profiles along Curvilinear Paths: A Flexible Scheme for the Analysis of Charge Displacement upon Intermolecular Interactions.沿曲线轨迹的电荷流轮廓:分析分子间相互作用时电荷位移的灵活方案。
Molecules. 2021 Oct 23;26(21):6409. doi: 10.3390/molecules26216409.
2
Local charge-displacement analysis: Targeting local charge-flows in complex intermolecular interactions.局域电荷转移分析:靶向复杂分子间相互作用中的局域电荷流。
J Chem Phys. 2022 Aug 28;157(8):084107. doi: 10.1063/5.0095142.
3
Advances in Charge Displacement Analysis.电荷位移分析的进展
J Chem Theory Comput. 2016 Mar 8;12(3):1236-44. doi: 10.1021/acs.jctc.5b01166. Epub 2016 Feb 12.
4
Hapticity uncovered: real-space bonding indicators for zincocene chemistry.揭示触觉:金属茂化学的实空间成键指标。
Chemistry. 2012 Sep 10;18(37):11647-61. doi: 10.1002/chem.201200870. Epub 2012 Aug 14.
5
Bond paths between distant atoms do not necessarily indicate dominant interactions.远距离原子之间的键径不一定表明存在主要相互作用。
J Comput Chem. 2018 Oct 5;39(26):2183-2195. doi: 10.1002/jcc.25532. Epub 2018 Oct 9.
6
Charge-displacement analysis for excited states.激发态的电荷转移分析。
J Chem Phys. 2014 Feb 7;140(5):054110. doi: 10.1063/1.4863411.
7
Combined analysis of chemical bonding in a Cu(II) dimer using QTAIM, Voronoi tessellation and Hirshfeld surface approaches.使用QTAIM、Voronoi镶嵌和Hirshfeld表面方法对铜(II)二聚体中的化学键进行联合分析。
Acta Crystallogr B Struct Sci Cryst Eng Mater. 2015 Oct;71(Pt 5):543-54. doi: 10.1107/S2052520615015279. Epub 2015 Sep 30.
8
Charge-displacement analysis via natural orbitals for chemical valence: charge transfer effects in coordination chemistry.基于化学价自然轨道的电荷位移分析:配位化学中的电荷转移效应
J Chem Phys. 2015 Feb 28;142(8):084112. doi: 10.1063/1.4908537.
9
Electron delocalization in acyclic and N-heterocyclic carbenes and their complexes: a combined experimental and theoretical charge-density study.
J Am Chem Soc. 2002 May 22;124(20):5865-80. doi: 10.1021/ja011761k.
10
Decomposition of Intermolecular Interactions in the Crystal Structure of Some Diacetyl Platinum(II) Complexes: Combined Hirshfeld, AIM, and NBO Analyses.一些二乙酰铂(II)配合物晶体结构中分子间相互作用的分解:Hirshfeld、AIM和NBO联合分析
Molecules. 2016 Dec 6;21(12):1669. doi: 10.3390/molecules21121669.

本文引用的文献

1
Chemical bonding in cuprous complexes with simple nitriles: octet rule and resonance concepts quantitative charge-redistribution analysis.一价铜配合物与简单腈类的成键:八隅体规则和共振概念——定量电荷转移分析。
Phys Chem Chem Phys. 2020 Sep 23;22(36):20238-20247. doi: 10.1039/d0cp01536a.
2
Chemical promenades: Exploring potential-energy surfaces with immersive virtual reality.化学漫步:通过沉浸式虚拟现实探索势能面
J Comput Chem. 2020 May 15;41(13):1310-1323. doi: 10.1002/jcc.26172. Epub 2020 Feb 14.
3
The Chemical Bond and s-d Hybridization in Coinage Metal(I) Cyanides.
货币金属(I)氰化物中的化学键与s-d杂化
Inorg Chem. 2019 Sep 3;58(17):11716-11729. doi: 10.1021/acs.inorgchem.9b01694. Epub 2019 Aug 9.
4
Ferrocenes with simple chiral substituents: an in-depth theoretical and experimental VCD and ECD study.具有简单手性取代基的二茂铁:深入的理论与实验振动圆二色光谱和电子圆二色光谱研究。
Phys Chem Chem Phys. 2019 May 8;21(18):9419-9432. doi: 10.1039/c9cp00437h.
5
Unveiling the Sulfur-Sulfur Bridge: Accurate Structural and Energetic Characterization of a Homochalcogen Intermolecular Bond.揭示硫-硫桥:同主族硫属元素分子间键的精确结构与能量表征
Angew Chem Int Ed Engl. 2018 Nov 26;57(48):15822-15826. doi: 10.1002/anie.201810637. Epub 2018 Oct 31.
6
Diving into chemical bonding: An immersive analysis of the electron charge rearrangement through virtual reality.深入探讨化学键:通过虚拟现实沉浸式分析电子电荷重排。
J Comput Chem. 2018 Dec 5;39(31):2607-2617. doi: 10.1002/jcc.25523. Epub 2018 Oct 2.
7
Theory Meets Experiment for Noncovalent Complexes: The Puzzling Case of Pnicogen Interactions.非共价配合物的理论与实验:磷族元素相互作用的谜题
Angew Chem Int Ed Engl. 2018 Oct 15;57(42):13853-13857. doi: 10.1002/anie.201807751. Epub 2018 Sep 19.
8
How π back-donation quantitatively controls the CO stretching response in classical and non-classical metal carbonyl complexes.π反馈配位如何定量控制经典和非经典金属羰基配合物中的CO伸缩响应。
Chem Sci. 2016 Feb 1;7(2):1174-1184. doi: 10.1039/c5sc02971f. Epub 2015 Oct 26.
9
Exploiting coordination geometry to selectively predict the σ-donor and π-acceptor abilities of ligands: a back-and-forth journey between electronic properties and spectroscopy.利用配位几何结构选择性预测配体的σ给体和π受体能力:电子性质与光谱学之间的往复之旅
Chem Commun (Camb). 2018 Mar 1;54(19):2397-2400. doi: 10.1039/c7cc09627e.
10
Charge-Displacement Analysis via Natural Orbitals for Chemical Valence in the Four-Component Relativistic Framework.基于自然化学价轨道的电荷转移分析:四分量相对论框架
J Chem Theory Comput. 2018 Mar 13;14(3):1286-1296. doi: 10.1021/acs.jctc.7b01077. Epub 2018 Feb 14.