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唇形科(唇形科植物)叶绿体全基因组的特征分析

Characterization of the complete chloroplast genome of (Lamiaceae).

作者信息

Zhou Yan, Zhang Hongrui, Ping Hongming, Ding Yining, Hu Saiwen, Bi Guangyao, Li Cuicui, Li Heming, Huang Yong, Guo Linxiu, Ma Xingli, Xia Zhi

机构信息

College of Agronomy, Henan Agricultural University, Zhengzhou, China.

School of Computer Science, University of Nottingham Ningbo China, Ningbo, China.

出版信息

Mitochondrial DNA B Resour. 2021 Nov 12;6(12):3406-3408. doi: 10.1080/23802359.2021.2000899. eCollection 2021.

DOI:10.1080/23802359.2021.2000899
PMID:34790877
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8592588/
Abstract

(Lamiaceae) is an important horticultural plant with great ornamental and economic value. Here, we report the complete chloroplast genome of this species. The chloroplast genome was determined to be 151021 bp and the GC contents was 38.0%. The sequence includes a large single copy (LSC) region of 82,262 bp, a small single copy (SSC) region of 17,537 bp, and two separated inverted regions of 25,611 bp each. It contains 130 unique genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Based on the chloroplast genomes data of 26 species in , our result indicated that , , and formed one clade with Bootstrap = 100%. The four species belong to subgenus , and was closely related to and . This result will facilitate population, genetic diversity and phylogenetic studies of .

摘要

唇形科是一种具有重要观赏和经济价值的园艺植物。在此,我们报道了该物种的完整叶绿体基因组。叶绿体基因组大小为151021 bp,GC含量为38.0%。该序列包括一个82262 bp的大单拷贝(LSC)区域、一个17537 bp的小单拷贝(SSC)区域以及两个各为25611 bp的反向重复区域。它包含130个独特基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。基于唇形科26个物种的叶绿体基因组数据,我们的结果表明,[具体物种1]、[具体物种2]、[具体物种3]和[具体物种4]形成一个分支,自展支持率为100%。这四个物种属于[属名]亚属,且[具体物种1]与[具体物种2]和[具体物种3]密切相关。这一结果将有助于[物种名称]的种群、遗传多样性和系统发育研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d136/8592588/894ecc461792/TMDN_A_2000899_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d136/8592588/894ecc461792/TMDN_A_2000899_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d136/8592588/894ecc461792/TMDN_A_2000899_F0001_B.jpg

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本文引用的文献

1
NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
2
A large-scale chloroplast phylogeny of the Lamiaceae sheds new light on its subfamilial classification.大规模唇形科叶绿体系统发育研究对其亚科分类提出了新的见解。
Sci Rep. 2016 Oct 17;6:34343. doi: 10.1038/srep34343.
3
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
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Mitochondrial DNA B Resour. 2022 Jul 28;7(7):1384-1386. doi: 10.1080/23802359.2022.2101398. eCollection 2022.
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
4
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
5
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
6
The volatile constituents of Salvia leucantha.
Nat Prod Commun. 2010 Jun;5(6):937-8.