Center of Biotechnology and Microbiology, University of Peshawar, Peshawar, KPK, Pakistan.
Department of Agricultural Chemistry, University of Agriculture, Peshawar, KPK, Pakistan.
BMC Microbiol. 2021 Nov 20;21(1):322. doi: 10.1186/s12866-021-02371-3.
Penicillin was the first and most famous fungal secondary metabolite used as broad spectrum antibiotic that revolutionarised pharmaceutical research and also saved millions of lives. The over optimistic belief in 1967 that sufficient antibiotics had been discovered to defeat infectious diseases was quickly crashed with the appearance of multidrug resistant (MDR) bacteria in 1990s. This has posed a serious threat to mankind. Although scientists are making efforts to synthesize and discover new antibiotics there are not enough new drugs in pharmaceutical pipeline to beat the pace at which MDR bacteria are emerging. In view of this there is an urgent and serious medical need for new bioactive compounds to be discovered to treat infections caused by MDR pathogens. The present study is aimed to investigate the antibacterial potential of Aspergillus flavus originated compounds that may act as drug leads to treat future infections.
Among the 6 isolated fungal strains from the rhizosphere of Mentha piperetta, one was processed for isolation of secondary metabolites on the basis of preliminary antibacterial testing. Observation of morphological and microscopic features helped in identification of the fungal strain as Aspergillus flavus. Potato Dextrose Agar (PDA) medium was used for fungal growth while Czapec Yeast Broth (CYB) medium was used for production of fungal metabolites. Column chromatography technique was utilized for purification of compound from crude fungal extract and the mass of the compound was determined using Liquid Chromatography Mass Spectrometry (LCMS) method. Structure elucidation of the pure compound was performed using 500 Varian Nuclear Magnetic Resonance (NMR) machine. Docking was performed using Glide SP algorithm. Agar well diffusion method was used to determine the invitro antibacterial potential of the compound against two MDR bacterial strains i.e. Staphylococcus aureus and Proteus vulgaris. For this a total of 4 dose concentrations i.e. (100, 250, 500, 1000 μg mL) of the compound were prepared and applied to bacterial strains on Mueller Hinton agar using tetracycline as control.
The chemical name of the purified compound from A. flavus was determined as (2E)-3-[(3S, 4R)-8-hydroxy-3, 4-dimethyl-1-oxo-3, 4-dihydro-1H-2- benzopyran-7-yl] prop-2-enoic acid with the formula CHO and exact mass of 262.08. The in-Silico analysis showed that this compound has the potential to inhibit the binding pocket of S. aureus TyrRS (1JII) with docking score of - 8.67 Kcal mole. The results obtained from invitro experiments were encouraging as at 1000 μg mL the compound showed 58.8% inhibition against S. aureus and 28% inhibition against P. vulgaris.
The pure compound with formula CHO and exact mass of 262 exhibited antibacterial potential both insilico and invitro against both Gram negative and Gram positive bacteria. The compound was more active against S. aureus in comparison to P. vulgaris. From the obtained results it is concluded that this compound can be used as potent antibacterial candidate but further studies will be needed prior to its use as antibiotic.
青霉素是第一种也是最著名的真菌次生代谢产物,被用作广谱抗生素,彻底改变了药物研究,也挽救了数百万人的生命。1967 年,人们过于乐观地认为已经发现了足够的抗生素来战胜传染病,但 20 世纪 90 年代多药耐药(MDR)细菌的出现很快打破了这种乐观。这对人类构成了严重威胁。尽管科学家们正在努力合成和发现新的抗生素,但在药物研发管道中,新药物的数量还不足以跟上 MDR 细菌出现的速度。鉴于此,迫切需要发现新的生物活性化合物来治疗 MDR 病原体引起的感染。本研究旨在研究黄曲霉产生的化合物的抗菌潜力,这些化合物可能作为药物先导物来治疗未来的感染。
从薄荷的根际土壤中分离出的 6 株真菌菌株中,有一株根据初步的抗菌试验进行了分离次生代谢产物的处理。观察形态和微观特征有助于将真菌菌株鉴定为黄曲霉。马铃薯葡萄糖琼脂(PDA)培养基用于真菌生长,而察氏酵母肉汤(CYB)培养基用于真菌代谢产物的生产。柱色谱技术用于从粗真菌提取物中纯化化合物,并用液相色谱质谱法(LCMS)确定化合物的质量。使用 500V 瓦里安核磁共振(NMR)仪对纯化合物进行结构解析。使用 Glide SP 算法进行对接。琼脂孔扩散法用于测定化合物对两种 MDR 细菌金黄色葡萄球菌和普通变形杆菌的体外抗菌潜力。为此,共制备了 4 种浓度(100、250、500、1000μg/mL)的化合物,并用四环素作为对照,在 Mueller Hinton 琼脂上应用于细菌菌株。
从黄曲霉中分离出的纯化合物的化学名称被确定为(2E)-3-[(3S,4R)-8-羟基-3,4-二甲基-1-氧代-3,4-二氢-1H-2-苯并吡喃-7-基]丙-2-烯酸,分子式为 CHO,精确质量为 262.08。计算机模拟分析表明,该化合物具有抑制金黄色葡萄球菌 TyrRS(1JII)结合口袋的潜力,对接评分为-8.67Kcal/mol。体外实验结果令人鼓舞,在 1000μg/mL 时,该化合物对金黄色葡萄球菌的抑制率为 58.8%,对普通变形杆菌的抑制率为 28%。
具有化学式 CHO 和精确质量 262 的纯化合物在体内和体外均表现出抗菌潜力,对革兰氏阴性菌和革兰氏阳性菌均有活性。与普通变形杆菌相比,该化合物对金黄色葡萄球菌的活性更高。从获得的结果可以得出结论,该化合物可用作潜在的抗菌候选物,但在将其用作抗生素之前,还需要进一步的研究。