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分析 L. 中与 SI 相关的家族基因对 SI 信号的反应

Analysis of SI-Related Family Genes and Response of to SI Signal in L.

机构信息

College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.

出版信息

Genes (Basel). 2021 Oct 28;12(11):1719. doi: 10.3390/genes12111719.

Abstract

Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) is not only involved in carbohydrate metabolism, but also plays an important role in stress resistance. However, it has not been reported in . In this study, we performed a genome-wide identification of in and performed cloning and expression analysis of one of the differentially expressed genes, . A total of 16 members of the family were identified in , which were conserved, distributed unevenly on chromosomes and had tandem repeat genes. Most of the genes were down-regulated during self-pollination, and the highest expression was found in stigmas and sepals. Different transcriptome data showed that genes were differentially expressed under stress, which was consistent with the results of qRT-PCR. We cloned and analyzed the differentially expressed gene and found that it was in the down-regulated mode 1 h after self-pollination, and the expression was the highest in the stigma, which was consistent with the result of GUS staining. The promoter region of the gene not only has stress response elements and plant hormone response elements, but also has a variety of specific elements for regulating floral organ development. Subcellular localization indicates that the BoGAPC protein is located in the cytoplasm and belongs to the active protein in the cytoplasm. The results of prokaryotic expression showed that the size of the BoGAPC protein was about 37 kDa, which was consistent with the expected results, indicating that the protein was induced in prokaryotic cells. The results of yeast two-hybrid and GST pull-down showed that the SRK kinase domain interacted with the BoGAPC protein. The above results suggest that the family of plays an important role in the process of plant stress resistance, and the gene may be involved in the process of self-incompatibility in , which may respond to SI by encoding proteins directly interacting with SRK.

摘要

甘油醛-3-磷酸脱氢酶(GAPDH)不仅参与碳水化合物代谢,还在抗逆性中发挥重要作用。然而,在 中尚未有报道。在本研究中,我们对 中的 进行了全基因组鉴定,并对其中一个差异表达基因 进行了克隆和表达分析。共鉴定出 中的 16 个家族成员,这些成员在染色体上保守分布不均匀,且具有串联重复基因。大多数基因在自花授粉过程中下调表达,在柱头和萼片中表达最高。不同的转录组数据表明, 基因在胁迫下差异表达,这与 qRT-PCR 的结果一致。我们克隆并分析了差异表达基因 ,发现其在自花授粉 1 小时后呈下调模式,在柱头中表达最高,与 GUS 染色结果一致。该基因的启动子区不仅具有应激反应元件和植物激素反应元件,还具有多种调节花器官发育的特异性元件。亚细胞定位表明,BoGAPC 蛋白位于细胞质中,属于细胞质中的活性蛋白。原核表达的结果表明,BoGAPC 蛋白的大小约为 37 kDa,与预期结果一致,表明该蛋白在原核细胞中被诱导。酵母双杂交和 GST 下拉的结果表明,SRK 激酶结构域与 BoGAPC 蛋白相互作用。上述结果表明, 中的 家族在植物抗逆性过程中发挥重要作用, 基因可能参与 中的自交不亲和过程,可能通过编码与 SRK 直接相互作用的蛋白质来响应 SI。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f6d/8618600/2cdac43bd58e/genes-12-01719-g001.jpg

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