Herbal Medicine Resources Research Center, Korea Institute of Oriental Medicine, Naju 58245, Korea.
Genes (Basel). 2021 Nov 5;12(11):1764. doi: 10.3390/genes12111764.
, commonly known as burnet, is a genus in the family Rosaceae native to the temperate regions of the Northern hemisphere. Five of its thirty species are distributed in Korea: , , , , and . has been designated as a medicinal remedy in the Chinese and Korean Herbal Pharmacopeias. Despite being a valuable medicinal resource, the morphological and genomic information, as well as the genetic characteristics of , are still elusive. Therefore, we carried out the first comprehensive study on the floral micromorphology, palynology, and complete chloroplast (cp) genome of the species. The outer sepal waxes and hypanthium characters showed diagnostic value, despite a similar floral micromorphology across different species. All the studied pollen were small to medium, oblate to prolate-spheroidal, and their exine ornamentation was microechinate. The orbicules, which are possibly synapomorphic, were consistently absent in this genus. Additionally, the cp genomes of , , and have been completely sequenced. The comparative analysis of the reported cp genomes revealed local divergence regions. The nucleotide diversity of and , referred to as hotspot regions, revealed the highest pi values in six . The indicated positive selection pressures as a species-specific variation in . The and species had genes at the selected pressures. We developed new DNA barcodes that distinguish the typical and var. , important herbal medicinal plants, from other similar species with species-specific distinctive markers. The phylogenetic trees showed the positions of the reported species; , , and showed the nearest genetic distance. The results of our comprehensive study on micromorphology, pollen chemistry, cp genome analysis, and the development of species identification markers can provide valuable information for future studies on , including those highlighting it as an important medicinal resource.
, 通常被称为白头翁,是蔷薇科的一个属,原产于北半球温带地区。其 30 个物种中有 5 个分布在韩国:,,,, 和 。 已被中国和韩国草药药典指定为药用疗法。尽管 是一种有价值的药用资源,但它的形态学和基因组信息以及遗传特征仍然难以捉摸。因此,我们对 物种的花部微形态学、花粉学和完整叶绿体(cp)基因组进行了首次综合研究。尽管不同物种的花部微形态相似,但外萼片蜡质和托叶特征具有诊断价值。所有研究的 花粉均为小至中型,扁球形至长球形,其外壁纹饰为微刺状。可能是同源的 orbicules 在这个属中始终不存在。此外, 、 和 的 cp 基因组已完全测序。对已报道的 cp 基因组的比较分析揭示了局部分化区域。 和 ,称为热点区域,的核苷酸多样性显示六个 中的最高 pi 值。 表明 作为物种特异性变异存在正选择压力。 和 物种在选择压力下具有 基因。我们开发了新的 DNA 条形码,可以区分典型的 和 变种,重要的草药植物,以及其他具有物种特异性独特标记的相似 物种。系统发育树显示了报道的 物种的位置; 、 和 显示出最近的遗传距离。我们对微形态学、花粉化学、cp 基因组分析以及物种鉴定标记开发的综合研究结果可为未来对 的研究提供有价值的信息,包括强调其作为重要药用资源的研究。