Department of Biomedical Informatics, College of Medicine, Gachon University, Incheon 21565, Korea.
Department of Biomedical Informatics, Center for Genome Science, National Institute of Health, KCDC, Osong, Cheongju-si 28159, Korea.
Genes (Basel). 2021 Nov 16;12(11):1804. doi: 10.3390/genes12111804.
Genome-wide association studies have expanded our understanding of the genetic variation of hypertension. Hypertension and blood pressure are influenced by sex-specific differences; therefore, genetic variants may have sex-specific effects on phenotype. To identify the genetic factors influencing the sex-specific differences concerning hypertension, we conducted a heterogeneity analysis of a genome-wide association study (GWAS) on 13,926 samples from a Korean population. Using the Illumina exome chip data of the population, we performed GWASs of the male and female population independently and applied a statistical test that identified heterogeneous effects of the variants between the two groups. To gain information about the biological implication of the genetic heterogeneity, we used gene set enrichment analysis with GWAS catalog and pathway gene sets. The heterogeneity analysis revealed that the rs11066015 of ACAD10 was a significant locus that had sex-specific genetic effects on the development of hypertension. The rs2074356 of HECTD4 also showed significant genetic heterogeneity in systolic blood pressure. The enrichment analysis showed significant results that are consistent with the pathophysiology of hypertension. These results indicate a sex-specific genetic susceptibility to hypertension that should be considered in future genetic studies of hypertension.
全基因组关联研究扩展了我们对高血压遗传变异的认识。高血压和血压受到性别特异性差异的影响;因此,遗传变异可能对表型具有性别特异性影响。为了确定影响高血压性别特异性差异的遗传因素,我们对来自韩国人群的 13926 个样本进行了全基因组关联研究(GWAS)的异质性分析。使用该人群的 Illumina 外显子芯片数据,我们独立地对男性和女性人群进行了 GWAS,并应用了一种统计检验,该检验鉴定了两组之间变异的异质作用。为了获得关于遗传异质性生物学意义的信息,我们使用了带有 GWAS 目录和途径基因集的基因集富集分析。异质性分析表明,ACAD10 的 rs11066015 是一个显著的位点,它对高血压的发展具有性别特异性的遗传影响。HECTD4 的 rs2074356 在收缩压方面也表现出显著的遗传异质性。富集分析显示出与高血压病理生理学一致的显著结果。这些结果表明,高血压存在性别特异性的遗传易感性,这在未来的高血压遗传研究中应该加以考虑。