Department of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru 570015, India.
Division of Biochemistry, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru 570015, India.
Molecules. 2021 Nov 14;26(22):6863. doi: 10.3390/molecules26226863.
NAD(P)H:quinone acceptor oxidoreductase-1 (NQO1) is a ubiquitous flavin adenine dinucleotide-dependent flavoprotein that promotes obligatory two-electron reductions of quinones, quinonimines, nitroaromatics, and azo dyes. NQO1 is a multifunctional antioxidant enzyme whose expression and deletion are linked to reduced and increased oxidative stress susceptibilities. NQO1 acts as both a tumor suppressor and tumor promoter; thus, the inhibition of NQO1 results in less tumor burden. In addition, the high expression of NQO1 is associated with a shorter survival time of cancer patients. Inhibiting NQO1 also enables certain anticancer agents to evade the detoxification process. In this study, a series of phytobioactives were screened based on their chemical classes such as coumarins, flavonoids, and triterpenoids for their action on NQO1. The in silico evaluations were conducted using PyRx virtual screening tools, where the flavone compound, Orientin showed a better binding affinity score of -8.18 when compared with standard inhibitor Dicumarol with favorable ADME properties. An MD simulation study found that the Orientin binding to NQO1 away from the substrate-binding site induces a potential conformational change in the substrate-binding site, thereby inhibiting substrate accessibility towards the FAD-binding domain. Furthermore, with this computational approach we are offering a scope for validation of the new therapeutic components for their in vitro and in vivo efficacy against NQO1.
NAD(P)H:醌氧化还原酶 1(NQO1)是一种普遍存在的黄素腺嘌呤二核苷酸依赖性黄素蛋白,可促进醌、亚胺、硝基芳烃和偶氮染料的强制性两电子还原。NQO1 是一种多功能抗氧化酶,其表达和缺失与降低和增加的氧化应激易感性有关。NQO1 既是肿瘤抑制剂又是肿瘤促进剂;因此,抑制 NQO1 会导致肿瘤负担减轻。此外,NQO1 的高表达与癌症患者的生存时间缩短有关。抑制 NQO1 还使某些抗癌药物能够逃避解毒过程。在这项研究中,根据其化学类别(如香豆素、类黄酮和三萜)筛选了一系列植物生物活性物质,以研究它们对 NQO1 的作用。使用 PyRx 虚拟筛选工具进行了计算机评估,其中黄酮类化合物,Orientin 的结合亲和力评分比标准抑制剂 Dicumarol 更好,为-8.18,并且具有良好的 ADME 特性。MD 模拟研究发现,Orientin 与远离底物结合位点的 NQO1 结合会诱导底物结合位点的潜在构象变化,从而抑制底物与 FAD 结合域的可及性。此外,通过这种计算方法,我们为验证新的治疗成分提供了一个针对 NQO1 的体外和体内功效的验证范围。