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口袋因子与乙型肝炎病毒衣壳的结合改变了苯丙氨酸 97 的构象。

Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.

机构信息

Rudolf Virchow Center, Center for Integrative and Translational Bioimaging, University of Würzburg, 97080 Würzburg, Germany.

Biocenter, University of Würzburg, 97074 Würzburg, Germany.

出版信息

Viruses. 2021 Oct 20;13(11):2115. doi: 10.3390/v13112115.

DOI:10.3390/v13112115
PMID:34834922
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8618838/
Abstract

(1) Background: During maturation of the Hepatitis B virus, a viral polymerase inside the capsid transcribes a pre-genomic RNA into a partly double stranded DNA-genome. This is followed by envelopment with surface proteins inserted into a membrane. Envelopment is hypothetically regulated by a structural signal that reports the maturation state of the genome. NMR data suggest that such a signal can be mimicked by the binding of the detergent Triton X 100 to hydrophobic pockets in the capsid spikes. (2) Methods: We have used electron cryo-microscopy and image processing to elucidate the structural changes that are concomitant with the binding of Triton X 100. (3) Results: Our maps show that Triton X 100 binds with its hydrophobic head group inside the pocket. The hydrophilic tail delineates the outside of the spike and is coordinated via Lys-96. The binding of Triton X 100 changes the rotamer conformation of Phe-97 in helix 4, which enables a π-stacking interaction with Trp-62 in helix 3. Similar changes occur in mutants with low secretion phenotypes (P5T and L60V) and in a mutant with a pre-mature secretion phenotype (F97L). (4) Conclusion: Binding of Triton X 100 is unlikely to mimic structural maturation because mutants with different secretion phenotypes show similar structural responses.

摘要

(1)背景:在乙型肝炎病毒成熟过程中,衣壳内的病毒聚合酶将前基因组 RNA 转录成部分双链 DNA 基因组。随后,表面蛋白插入到包膜中。包膜理论上受报告基因组成熟状态的结构信号调控。NMR 数据表明,这种信号可以通过去污剂 Triton X 100 与衣壳刺突中的疏水性口袋结合来模拟。(2)方法:我们使用电子冷冻显微镜和图像处理来阐明与 Triton X 100 结合相伴的结构变化。(3)结果:我们的图谱显示,Triton X 100 带有其疏水性头部基团在口袋内结合。亲水性尾巴描绘了刺突的外部,并通过 Lys-96 进行协调。Triton X 100 的结合改变了 Phe-97 在 4 号螺旋中的旋转构象,使其能够与 3 号螺旋中的 Trp-62 发生 π-堆积相互作用。具有低分泌表型的突变体(P5T 和 L60V)和具有早熟分泌表型的突变体(F97L)都发生了类似的变化。(4)结论:Triton X 100 的结合不太可能模拟结构成熟,因为具有不同分泌表型的突变体显示出相似的结构反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/31aa0b859cbb/viruses-13-02115-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/01fac3787925/viruses-13-02115-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/1e7d09900abd/viruses-13-02115-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/37bf73d14e05/viruses-13-02115-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/9b66b0657904/viruses-13-02115-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/165474e6f9d7/viruses-13-02115-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/4faa9749ccad/viruses-13-02115-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/bc766e62c9a9/viruses-13-02115-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/31aa0b859cbb/viruses-13-02115-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/01fac3787925/viruses-13-02115-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/1e7d09900abd/viruses-13-02115-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/37bf73d14e05/viruses-13-02115-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/9b66b0657904/viruses-13-02115-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/165474e6f9d7/viruses-13-02115-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/4faa9749ccad/viruses-13-02115-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/bc766e62c9a9/viruses-13-02115-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb3/8618838/31aa0b859cbb/viruses-13-02115-g008.jpg

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