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识别氧化应激基因在预测胶质瘤患者预后中的作用。

Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients.

机构信息

Department of Neurosurgery, Qilu Hospital, Cheeloo College of Medicine, Shandong University and Institute of Brain and Brain-Inspired Science, Shandong University, Jinan, Shandong, China (mainland).

Key Laboratory of Brain Function Remodeling, Qilu Hospital of Shandong University, Jinan, Shandong, China (mainland).

出版信息

Med Sci Monit. 2021 Nov 27;27:e934161. doi: 10.12659/MSM.934161.

Abstract

BACKGROUND Gliomas are primary aggressive brain tumors with poor prognoses. Oxidative stress plays a crucial role in the tumorigenesis and drug resistance of gliomas. The aim of the present study was to use integrated bioinformatics analyses to evaluate the prognostic value of oxidative stress-related genes (OSRGs) in glioma. MATERIAL AND METHODS Disease- and prognosis-associated OSRGs were identified using microarray and clinical data from the Chinese Glioma Genome Atlas database. Functional enrichment, gene-gene interaction, protein-protein interaction, and survival analyses were performed in screened OSRGs. The protein expression was validated by the Human Protein Atlas database. A risk score model was constructed and verified through Cox regression, receiver operating characteristic curve, principal component, and stratified analyses. The Cancer Genome Atlas (TCGA) database was used for external validation. A nomogram was constructed to facilitate the clinical application. RESULTS Twenty-one disease-associated and 14 prognosis-associated OSRGs were identified. Enrichment analyses indicated that these signature OSRGs were involved in tumorigenesis and drug resistance of glioma. The risk score model demonstrated a significant difference in overall survival between the high- and low-risk groups. The area under the curve and hazard ratio (1.296) revealed the independent prognostic value of the model. The model exhibited good predictive efficacy in the TCGA cohort. A clinical nomogram was constructed to calculate survival rates in glioma patients at 1, 3, and 5 years. CONCLUSIONS Our comprehensive study indicated that OSRGs were valuable for prognosis prediction in glioma, which provides a novel insight into the relationship between oxidative stress and glioma and a potential therapeutic strategy for glioma patients.

摘要

背景

神经胶质瘤是一种具有不良预后的原发性侵袭性脑肿瘤。氧化应激在神经胶质瘤的发生和耐药中起着至关重要的作用。本研究旨在使用综合的生物信息学分析来评估与氧化应激相关的基因(OSRGs)在神经胶质瘤中的预后价值。

材料与方法

使用中国神经胶质瘤基因组图谱数据库中的微阵列和临床数据,鉴定与疾病和预后相关的 OSRGs。对筛选出的 OSRGs 进行功能富集、基因-基因相互作用、蛋白质-蛋白质相互作用和生存分析。通过人类蛋白质图谱数据库验证蛋白质表达。通过 Cox 回归、接收者操作特征曲线、主成分和分层分析构建和验证风险评分模型。使用癌症基因组图谱(TCGA)数据库进行外部验证。构建列线图以促进临床应用。

结果

鉴定出 21 个与疾病相关和 14 个与预后相关的 OSRGs。富集分析表明,这些特征性 OSRGs 参与了神经胶质瘤的发生和耐药。风险评分模型显示高风险组和低风险组之间的总生存期存在显著差异。曲线下面积和风险比(1.296)表明该模型具有独立的预后价值。该模型在 TCGA 队列中表现出良好的预测效果。构建了一个临床列线图,以计算神经胶质瘤患者在 1、3 和 5 年内的生存率。

结论

我们的综合研究表明,OSRGs 对神经胶质瘤的预后预测具有重要价值,为氧化应激与神经胶质瘤之间的关系提供了新的见解,并为神经胶质瘤患者提供了一种潜在的治疗策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2827/8634738/8ada1e78a257/medscimonit-27-e934161-g001.jpg

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