College of Fisheries, Engineering Research Center of Green Development for Conventional Aquatic Biological Industry in the Yangtze River Economic Belt, Ministry of Education, Huazhong Agricultural University, No.1 Shizishan Stress, Hongshan District, Wuhan, 430070, Hubei Province, China.
Department of Aquatic Bioscience, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Bunkyo, Tokyo, 113-8657, Japan.
Funct Integr Genomics. 2022 Feb;22(1):65-76. doi: 10.1007/s10142-021-00822-8. Epub 2021 Nov 27.
Air-breathing has evolved independently serval times with a variety of air-breathing organs (ABOs) in fish. The physiology of the air-breathing in bimodal respiration fish has been well understood, while studies on molecular mechanisms of the character are very limited. In the present study, we first determined the gill indexes of 110 fish species including 25 and 85 kinds of bimodal respiration fishes and non-air-breathing fishes, respectively. Then combined with histological observations of gills and ABOs/non-ABOs in three bimodal respiration fishes and two non-air breathing fishes, we found that the bimodal respiration fish was always of a degeneration gill and a well-vascularized ABO. Meanwhile, a comparative transcriptome analysis of posterior intestines, namely a well vascularized ABO in Misgurnus anguillicaudatus and a non-ABO in Leptobotia elongata, was performed to expound molecular variations of the air-breathing character. A total of 5,003 orthologous genes were identified. Among them, 1,189 orthologous genes were differentially expressed, which were enriched in 14 KEGG pathways. More specially, the expressions of hemoglobin genes and various HIF/VEGF signaling pathway genes were obviously upregulated in the ABO of M. anguillicaudatus. Moreover, we found that HIF-1α, VEGFAa, and MAP2K1 were co-expressed dramatically higher in ABOs of bimodal respiration fishes than those of non-ABOs of non-air-breathing fishes. These results indicated that the HIF/VEGF pathway played an important role in ABO angiogenesis/formation to promote fish to do aerial respiration. This study will contribute to our understanding of molecular mechanisms of air-breathing in fish.
呼吸空气在鱼类中已经独立进化了多次,产生了各种呼吸空气的器官(ABO)。具有双重呼吸的鱼类的呼吸空气生理学已经得到了很好的理解,而关于该特征的分子机制的研究却非常有限。在本研究中,我们首先确定了包括 25 种和 85 种双重呼吸鱼类和非呼吸空气鱼类在内的 110 种鱼类的鳃指数。然后,结合对三种具有双重呼吸和两种非呼吸空气鱼类的鳃和 ABO/非 ABO 的组织学观察,我们发现双重呼吸鱼类总是具有退化的鳃和血管丰富的 ABO。同时,我们对后肠(即Misgurnus anguillicaudatus 中血管丰富的 ABO 和 Leptobotia elongata 中的非 ABO)进行了比较转录组分析,以阐述呼吸空气特征的分子变化。共鉴定了 5003 个直系同源基因。其中,1189 个直系同源基因表达差异,富集在 14 个 KEGG 途径中。更特别的是,血红蛋白基因和各种 HIF/VEGF 信号通路基因在 M. anguillicaudatus 的 ABO 中的表达明显上调。此外,我们发现 HIF-1α、VEGFAa 和 MAP2K1 在双重呼吸鱼类的 ABO 中的表达明显高于非呼吸空气鱼类的非 ABO 中的表达。这些结果表明,HIF/VEGF 通路在 ABO 血管生成/形成中起重要作用,以促进鱼类进行空气呼吸。本研究将有助于我们理解鱼类呼吸空气的分子机制。