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专性外共生体的形态学揭示新属:一种新的环热带海洋stilbonematine线虫属。

Morphology of obligate ectosymbionts reveals gen. nov.: A new circumtropical genus of marine stilbonematine nematodes.

作者信息

Scharhauser Florian, Zimmermann Judith, Ott Jörg A, Leisch Nikolaus, Gruber-Vodicka Harald R

机构信息

Department of Limnology and Bio-Oceanography University of Vienna Vienna Austria.

Max Planck Institute for Marine Microbiology Bremen Germany.

出版信息

Zool Scr. 2020 May;49(3):379-394. doi: 10.1111/zsc.12399. Epub 2020 Feb 20.

Abstract

Stilbonematinae are a subfamily of conspicuous marine nematodes, distinguished by a coat of sulphur-oxidizing bacterial ectosymbionts on their cuticle. As most nematodes, the worm hosts have a relatively simple anatomy and few taxonomically informative characters, and this has resulted in numerous taxonomic reassignments and synonymizations. Recent studies using a combination of morphological and molecular traits have helped to improve the taxonomy of Stilbonematinae but also raised questions on the validity of several genera. Here, we describe a new circumtropically distributed genus (Stilbonematinae) with three species: sp. nov., sp. nov. and sp. nov. We used single worm metagenomes to generate host 18S rRNA and cytochrome c oxidase I (COI) as well as symbiont 16S rRNA gene sequences. Intriguingly, COI alignments and primer matching analyses suggest that the COI is not suitable for PCR-based barcoding approaches in Stilbonematinae as the genera have a highly diverse base composition and no conserved primer sites. The phylogenetic analyses of all three gene sets, however, confirm the morphological assignments and support the erection of the new genus as well as corroborate the status of the other stilbonematine genera. most closely resembles the stilbonematine genus in overlapping sets of diagnostic features but can be distinguished from by the morphology of the genus-specific symbiont coat. Our re-analyses of key parameters of the symbiont coat morphology as character for all Stilbonematinae genera show that with amended descriptions, including the coat, highly reliable genus assignments can be obtained.

摘要

硫线虫亚科是一类引人注目的海洋线虫亚科,其特征是角质层上有一层硫氧化细菌外共生体。与大多数线虫一样,这些线虫宿主的解剖结构相对简单,且分类学上的信息特征较少,这导致了众多的分类重新分配和同义词合并。最近结合形态学和分子特征的研究有助于改进硫线虫亚科的分类,但也引发了对几个属有效性的质疑。在这里,我们描述了一个新的环热带分布属(硫线虫亚科),包含三个物种:新种、新种和新种。我们使用单条线虫宏基因组来生成宿主18S核糖体RNA和细胞色素c氧化酶I(COI)以及共生体16S核糖体RNA基因序列。有趣的是,COI比对和引物匹配分析表明,COI不适用于基于PCR的硫线虫亚科条形码方法,因为这些属的碱基组成高度多样,且没有保守的引物位点。然而,对所有三个基因集的系统发育分析证实了形态学分类,支持了新属的建立,并确证了其他硫线虫属的地位。在重叠的诊断特征组中与硫线虫属最相似,但可以通过属特异性共生体外壳的形态与区分开来。我们对作为所有硫线虫属特征的共生体外壳形态关键参数的重新分析表明,通过修订描述,包括外壳描述,可以获得高度可靠的属分类。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3567/8614112/ef3f8a79240e/ZSC-49-379-g005.jpg

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