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调控RNA赋予肠道定植潜在的选择优势。

The Regulatory RNA Confers a Potential Selective Advantage to for Intestinal Colonization.

作者信息

Reissier Sophie, Le Neindre Killian, Bordeau Valérie, Dejoies Loren, Le Bot Audrey, Felden Brice, Cattoir Vincent, Revest Matthieu

机构信息

Unité Inserm U1230, Université de Rennes 1, Rennes, France.

Service de Bactériologie-Hygiène Hospitalière & CNR de la Résistance aux Antibiotiques (Laboratoire Associé 'Entérocoques'), CHU de Rennes, Rennes, France.

出版信息

Front Microbiol. 2021 Nov 10;12:757227. doi: 10.3389/fmicb.2021.757227. eCollection 2021.

DOI:10.3389/fmicb.2021.757227
PMID:34858368
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8631354/
Abstract

The aim of this study was to evaluate the role of the regulatory small RNA (sRNA) Ern0160 in gastrointestinal tract (GIT) colonization by . For this purpose, four strains of were used, Aus0004 (WT), an -deleted Aus0004 mutant (Δ0160), a -complemented Δ0160 strain overexpressing (Δ0160_0160), and a strain Δ0160 with an empty pAT29 vector (Δ0160_pAT29). Strains were studied both and , alone and in competitive assays. In experiments, no difference was observed between WT and Δ0160 strains cultured single while Δ0160_0160 strain grew more slowly than Δ0160_pAT29. In competitive assays, the WT strain was predominant compared to the deleted strain Δ0160 at the end of the experiment. Then, experiments were performed using a GIT colonization mouse model. Several existing models of GIT colonization were compared while a novel one, combining ceftriaxone and amoxicillin, was developed. A GIT colonization was performed with each strain alone, and no significant difference was noticed. By contrast, significant results were obtained with co-colonization experiments. With WT + Δ0160 suspension, a significant advantage for the WT strain was observed from day 5 to the end of the protocol, suggesting the involvement of 0160 in GIT colonization. With Δ0160_0160 + Δ0160_pAT29 suspension, the strain with the empty vector took the advantage from day 3 to the end of the protocol, suggesting a deleterious effect of overexpression. Altogether, these findings demonstrate the potential implication of Ern0160 in GIT colonization of . Further investigations are needed for the identification of sRNA target(s) in order to decipher underlying molecular mechanisms.

摘要

本研究的目的是评估调控小RNA(sRNA)Ern0160在[具体细菌名称]胃肠道(GIT)定植中的作用。为此,使用了四株[具体细菌名称],Aus0004(野生型)、缺失[具体基因名称]的Aus0004突变体(Δ0160)、过表达[具体基因名称]的[具体基因名称]互补Δ0160菌株(Δ0160_0160)以及带有空pAT29载体的菌株Δ0160(Δ0160_pAT29)。对这些菌株分别进行了体外和体内研究,包括单独培养和竞争试验。在体外实验中,单独培养时野生型和Δ0160菌株之间未观察到差异,而Δ0160_0160菌株的生长速度比Δ0160_pAT29慢。在竞争试验中,实验结束时野生型菌株相对于缺失菌株Δ0160占主导地位。然后,使用GIT定植小鼠模型进行了体内实验。比较了几种现有的GIT定植模型,同时开发了一种新的模型,该模型结合了头孢曲松和阿莫西林。分别用每种菌株进行GIT定植,未发现显著差异。相比之下,共定植实验获得了显著结果。对于野生型 + Δ0160悬液,从第5天到实验结束观察到野生型菌株具有显著优势,表明0160参与了GIT定植。对于Δ0160_0160 + Δ0160_pAT29悬液,带有空载体的菌株从第3天到实验结束占优势,表明[具体基因名称]过表达具有有害作用。总之,这些发现证明了Ern0160在[具体细菌名称]GIT定植中的潜在影响。为了解析潜在的分子机制,需要进一步研究以鉴定sRNA靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/a5a330431314/fmicb-12-757227-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/7d9aa461d0ec/fmicb-12-757227-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/423c9dbe3d63/fmicb-12-757227-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/cff8f7871536/fmicb-12-757227-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/e6de0a35f312/fmicb-12-757227-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/a5a330431314/fmicb-12-757227-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/7d9aa461d0ec/fmicb-12-757227-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/423c9dbe3d63/fmicb-12-757227-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/cff8f7871536/fmicb-12-757227-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/e6de0a35f312/fmicb-12-757227-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26f0/8631354/a5a330431314/fmicb-12-757227-g005.jpg

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