指数生长期和平稳生长期下SE-MC4的转录组测序数据。
Transcriptomics sequencing data of SE-MC4 under exponential and stationary growth stages.
作者信息
Afifudeen C L Wan, Loh Saw Hong, Wong Li Lian, Aziz Ahmad, Takahashi Kazutaka, Wahid Mohd Effendy Abd, Cha Thye San
机构信息
Satreps-Cosmos Laboratory, Central Laboratory Complex, University Malaysia Terengganu, Kuala Nerus, Terengganu 21030, Malaysia.
Institute of Marine Biotechnology, University Malaysia Terengganu, Kuala Nerus, Terengganu 21030, Malaysia.
出版信息
Data Brief. 2021 Nov 19;39:107607. doi: 10.1016/j.dib.2021.107607. eCollection 2021 Dec.
SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next generation RNA sequencing data of SE-MC4 under exponential and stationary growth stages. RNA of six samples were extracted and sequenced with insert size of 100 bp paired-end strategy using BGISEQ-500 platform to produce a total of 59.64 Gb data with 314 million reads. Sequences were filtered and assembled to form 53,307 number of gene sequences. Sequencing data were deposited in National Center for Biotechnology Information (NCBI) and can be accessed via BioProject ID PRJNA552165. This information can be used to enhance biomass production in SE-MC4 and other microalgae aimed towards improving biodiesel development.
SE-MC4是一种具有卓越油脂积累能力的非模式微藻。然而，由于细胞增殖率低，特别是在油脂诱导培养条件下长时间培养后，SE-MC4的生物量产量受到限制。现有数据包括SE-MC4在指数生长期和稳定生长期的下一代RNA测序数据。提取了六个样本的RNA，并使用BGISEQ-500平台采用100 bp插入片段大小的双末端策略进行测序，共产生了5.964Gb数据，包含3.14亿条 reads。对序列进行过滤和组装，形成了53307个基因序列。测序数据已存入美国国立生物技术信息中心（NCBI），可通过生物项目编号PRJNA552165访问。这些信息可用于提高SE-MC4和其他微藻的生物量产量，以促进生物柴油的发展。
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