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(变种)(法瑞尔)雷德尔的叶绿体基因组序列及特征分析

The chloroplast genome sequence and characteristic analysis of var. (Franch.) Rehder.

作者信息

Zheng Guangshun, Li Jianbo, Diao Shu

机构信息

National Permanent Scientific Research Base for Warm Temperate Zone Forestry of Jiulong Mountain in Beijing Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing, China.

Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2021 Nov 29;6(12):3508-3510. doi: 10.1080/23802359.2021.2005479. eCollection 2021.

Abstract

var. (Franch.) Rehder is a common small shrub in northern China. In order to study the fine nectar characteristics and water and soil conservation characteristics of , the analysis of chloroplast genome would provide theoretical basis for economic development and germplasm utilization of . The chloroplast genome sequence (accession number MW366787) of was accepted by high-throughput sequencing technology using a plant from Jiulongshan, Mentougou District, Beijing, China. The total length of the chloroplast genome is 154,438 bp, and the A, T, C and G content of the whole genome is 30.48, 31.26, 19.42, and 18.84%, respectively. The phylogenetic analysis of 16 Verbenaceae plants (including ) with as the outgroup was carried out by the maximum likelihood method; and the result shows that is relatively closed to .

摘要

变种(Franch.)Rehder是中国北方常见的小灌木。为了研究其精细的花蜜特征和水土保持特征,对其叶绿体基因组进行分析将为其经济开发和种质利用提供理论依据。利用来自中国北京门头沟区九龙山的一株植物,通过高通量测序技术获得了该变种的叶绿体基因组序列(登录号MW366787)。叶绿体基因组全长154,438 bp,全基因组的A、T、C和G含量分别为30.48%、31.26%、19.42%和18.84%。以该变种为外类群,采用最大似然法对16种马鞭草科植物(包括该变种)进行了系统发育分析;结果表明该变种与[具体物种]关系相对较近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c263/8635545/85465a590404/TMDN_A_2005479_F0001_C.jpg

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