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巴西半干旱地区鱼腥藻 BCCUSP55 的草案基因组序列揭示了其在抗癌应用方面的潜力。

Draft genome sequence of the cyanobacterium Sphaerospermopsis aphanizomenoides BCCUSP55 from the Brazilian semiarid region reveals potential for anti-cancer applications.

机构信息

Department of Cellular Biology, Institute of Biological Sciences, University of Brasília (UnB), Brasília, DF, Brazil.

Department of Biological Sciences, "Luiz de Queiroz" College of Agriculture, University of São Paulo (USP), Piracicaba, SP, Brazil.

出版信息

Arch Microbiol. 2021 Dec 4;204(1):4. doi: 10.1007/s00203-021-02602-1.

Abstract

Sphaerospermopsis aphanizomenoides is a filamentous nitrogen-fixing and bloom-forming cyanobacterium, which biomass can fertilize natural water with nutrients, especially through nitrogen fixation. The Sphaerospermopsis aphanizomenoides strain BCCUSP55 was previously isolated from a water supply reservoir in the Brazilian semiarid region, and its draft genome assembly coupled with the gene contents are reported here. The obtained BCCUSP55 draft genome comprised 254 scaffolds with a genome size estimated of 6,096,273 bp. In addition, it has 5250 predicted coding sequences (CDS) and the G + C content is 38.5%. Further, the BCCUSP55 draft genome presented the putative nocuolin A gene complete cluster, a natural oxadiazine that triggers apoptosis in human cancer cells. Thus, our results contribute to extend the knowledge on the genus Sphaerospermopsis and reveal its biotechnological potential.

摘要

微鞘藻(Sphaerospermopsis aphanizomenoides)是一种具有固氮能力和形成水华的丝状蓝藻,其生物量可以为天然水体提供营养物质,特别是通过固氮作用。先前从巴西半干旱地区的供水水库中分离出微鞘藻菌株 BCCUSP55,本研究报告了其基因组草图的组装情况和基因组成。获得的 BCCUSP55 基因组草图由 254 个支架组成,基因组大小估计为 6096273bp。此外,它有 5250 个预测编码序列(CDS),G+C 含量为 38.5%。此外,BCCUSP55 基因组草图中存在完整的 nocuolin A 基因簇,这是一种能够触发人类癌细胞凋亡的天然恶唑嗪。因此,我们的研究结果有助于扩展对微鞘藻属的认识,并揭示其生物技术潜力。

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