Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556, USA.
Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
Analyst. 2021 Dec 20;147(1):22-34. doi: 10.1039/d1an01954f.
Microbes, such as bacteria, can be described, at one level, as small, self-sustaining chemical factories. Based on the species, strain, and even the environment, bacteria can be useful, neutral or pathogenic to human life, so it is increasingly important that we be able to characterize them at the molecular level with chemical specificity and spatial and temporal resolution in order to understand their behavior. Bacterial metabolism involves a large number of internal and external electron transfer processes, so it is logical that electrochemical techniques have been employed to investigate these bacterial metabolites. In this mini-review, we focus on electrochemical and spectroelectrochemical methods that have been developed and used specifically to chemically characterize bacteria and their behavior. First, we discuss the latest mechanistic insights and current understanding of microbial electron transfer, including both direct and mediated electron transfer. Second, we summarize progress on approaches to spatiotemporal characterization of secreted factors, including both metabolites and signaling molecules, which can be used to discern how natural or external factors can alter metabolic states of bacterial cells and change either their individual or collective behavior. Finally, we address methods of single-cell characterization, which can uncover how heterogeneity in cell behavior is reflected in the behavior and properties of collections of bacteria, bacterial communities. Recent advances in (spectro)electrochemical characterization of bacteria have yielded important new insights both at the ensemble and the single-entity levels, which are furthering our understanding of bacterial behavior. These insights, in turn, promise to benefit applications ranging from biosensors to the use of bacteria in bacteria-based bioenergy generation and storage.
微生物,如细菌,可以在一个层面上被描述为小型的、自我维持的化学工厂。基于物种、菌株,甚至环境,细菌对人类生活可能是有用的、中性的或致病的,因此,我们越来越有必要能够在分子水平上以化学特异性和时空分辨率来对它们进行特征描述,以了解它们的行为。细菌代谢涉及大量的内部和外部电子转移过程,因此电化学技术被用于研究这些细菌代谢物是合乎逻辑的。在这篇迷你综述中,我们重点介绍了专门用于化学表征细菌及其行为的电化学和光谱电化学方法。首先,我们讨论了微生物电子转移的最新机制见解和当前理解,包括直接和介导的电子转移。其次,我们总结了用于时空特征描述分泌因子(包括代谢物和信号分子)的方法的进展,这些方法可用于辨别自然或外部因素如何改变细菌细胞的代谢状态并改变其个体或集体行为。最后,我们讨论了单细胞特征描述的方法,这些方法可以揭示细胞行为的异质性如何反映在细菌集合体、细菌群落的行为和特性中。(光谱)电化学细菌表征的最新进展在整体和单一实体水平上都产生了重要的新见解,这进一步加深了我们对细菌行为的理解。这些见解反过来有望有益于从生物传感器到利用细菌进行基于细菌的生物能源产生和存储的各种应用。