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3-巯基丙酸双加氧酶(MDO)的低自旋氰化物配合物揭示了外球 SHY 基序残基的影响。

Low-Spin Cyanide Complexes of 3-Mercaptopropionic Acid Dioxygenase (MDO) Reveal the Impact of Outer-Sphere SHY-Motif Residues.

机构信息

Department of Chemistry & Biochemistry, University of Alabama, 250 Hackberry Lane, Tuscaloosa, Alabama 35487, United States.

出版信息

Inorg Chem. 2021 Dec 20;60(24):18639-18651. doi: 10.1021/acs.inorgchem.1c01519. Epub 2021 Dec 9.

Abstract

3-Mercaptopropionic acid () dioxygenase (MDO) is a non-heme Fe(II)/O-dependent oxygenase that catalyzes the oxidation of thiol-substrates to yield the corresponding sulfinic acid. Hydrogen-bonding interactions between the Fe-site and a conserved set of three outer-sphere residues (Ser-His-Tyr) play an important catalytic role in the mechanism of this enzyme. Collectively referred to as the SHY-motif, the functional role of these residues remains poorly understood. Here, catalytically inactive Fe(III)-MDO precomplexed with was titrated with cyanide to yield a low-spin ( = 1/2) (/CN)-bound ternary complex (referred to as ). UV-visible and electron paramagnetic resonance (EPR) spectroscopy were used to monitor the binding of and cyanide. Comparisons of results obtained from SHY-motif variants (H157N and Y159F) were performed to investigate specific H-bonding interactions. For the wild-type enzyme, the binding of - and cyanide to the enzymatic Fe-site is selective and results in a homogeneous ternary complex. However, this selectivity is lost for the Y159F variant, suggesting that H-bonding interactions contributed from Tyr159 gate ligand coordination at the Fe-site. Significantly, the -values for the low-spin ferric site are diagnostic of the directionality of Tyr159 H-bond donation. Computational models coupled with CASSCF/NEVPT2-calculated -values were used to verify that a major shift in the central -value () displayed between wild-type and SHY variants could be attributed to the loss of Tyr159 H-bond donation to the Fe-bound cyanide. Applied to native cosubstrate, this H-bond donation provides a means to stabilize Fe-bound dioxygen and potentially explains the attenuated (∼15-fold) rate of catalytic turnover previously reported for MDO SHY-motif variants.

摘要

3-巯基丙酸()双加氧酶(MDO)是一种非血红素 Fe(II)/O 依赖性加氧酶,可催化硫醇底物氧化生成相应的亚磺酸。Fe 位与一组保守的外球残基(Ser-His-Tyr)之间的氢键相互作用在该酶的机制中发挥着重要的催化作用。这些残基统称为 SHY 基序,但它们的功能作用仍知之甚少。在这里,与预先形成的 Fe(III)-MDO 预复合物用氰化物滴定,生成低自旋(=1/2)(/CN)-结合的三元络合物(称为)。使用紫外-可见和电子顺磁共振(EPR)光谱监测与氰化物的结合。对 SHY 基序变体(H157N 和 Y159F)进行了比较,以研究特定的氢键相互作用。对于野生型酶,与酶 Fe 位结合的和氰化物具有选择性,并导致均相三元络合物。然而,这种选择性对于 Y159F 变体丢失,表明 Tyr159 氢键供体相互作用有助于 Fe 位的配体配位。重要的是,低自旋铁位的 -值可用于诊断 Tyr159 氢键供体的方向性。与 CASSCF/NEVPT2 计算的结合的计算模型 -值用于验证,野生型和 SHY 变体之间的中央 -值()的主要偏移可以归因于 Tyr159 对 Fe 结合的氰化物的氢键供体的损失。应用于天然辅助底物时,这种氢键供体提供了稳定 Fe 结合的双氧的方法,并可能解释了先前报道的 MDO SHY 基序变体的催化周转率降低(约 15 倍)。

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